Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1184 ATGGAATCTACCAATCTCCATCACCTTCATCAAGACCATGATCCTCACCACTCTTCTCCTTCTTCCACCCCCTCTCTCTTTCCCCATTCTTGGAACCCCAATAATGTTGCCCCTCTGAATGCTGGTAACTTGAGTCCAAATTTCCAAGAGCCAAATCCCAGATCAAGAGCTTTCATCACTCACAAGAAAGACATTGGAGGAGCTCATCATCATCAATTTTTGAACGCTTCAGGATTAGGTTATCATCATCAGTGGGCGAGTGGGGAAGAAAGCTGCGTGAGAAGTACTCAGTCAGATCAGTACGACCTTGACCTTCACTATTCAAAGATAAAGGAAGAGATCCCAGACGTTTTCCCCTGTAAATTCACTGAAATGCTAAACAGTGATACTGGTTCCAGTAATATGGAGAACAAAGATTTCAATGCTCTTAGTGACAAGCTCTTGCTCAAAACTCTCTCTTCTGCAGACTTCTATTCAACTTCTACTTCTCATAATTTTGCTAATAATTTTGGTGGTGGTGGTGGTTTGGGTGTGGGAGTGACACCTAGTAGGAGGACGAGCTTTAGCCAGATTTACCCAAGTATTAATATTTCAAACTTAAATAACCATTCTTCTAATTCCCCAGCTATTTCAAGCTCTTTGGATATGAATATGCAGAGCTCAGATCTATTGAACTCTGCAAGATTTAATGGCAGTTTGAGCCTACATGCCCAAGATGGTTTGGCCAGATTTGACAACGTTTCTTTTCGTCTCGATCATCATATGCATCAGCACCACCAAATCGAGAGGTCTTCATGCGACTTGAGTAATGTTAGGAAAGAGAAACTTGGAGATAGGATTGCGGCTCTTCAACAGTTGGTGGCTCCTTTTGGCAAGACAGACACAGCATCCGTACTCATGGAGGCCATTGGATACATCAAATTCCTTCAAAGCCAGGTCGAGACACTAAGCGTTCCATACATGAAGTCATCACGGAACCAGAACAACAGAGCCATGCAAGGGGTTCCAGGGTTAAGTGGGGCGAGAGAAGAACCAAAATTGGATCTAAGGAGCCGAGGCCTTTGTCTCGTGCCATTGTCATGTCTGTCTTACTTAGCTGATGGTGGTGGTGCTGGTGGTGGATTGTGGCAACAACCTGATTTTGGTGGCGCATCGCTATGA 1161 0.4419 MESTNLHHLHQDHDPHHSSPSSTPSLFPHSWNPNNVAPLNAGNLSPNFQEPNPRSRAFITHKKDIGGAHHHQFLNASGLGYHHQWASGEESCVRSTQSDQYDLDLHYSKIKEEIPDVFPCKFTEMLNSDTGSSNMENKDFNALSDKLLLKTLSSADFYSTSTSHNFANNFGGGGGLGVGVTPSRRTSFSQIYPSINISNLNNHSSNSPAISSSLDMNMQSSDLLNSARFNGSLSLHAQDGLARFDNVSFRLDHHMHQHHQIERSSCDLSNVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQSQVETLSVPYMKSSRNQNNRAMQGVPGLSGAREEPKLDLRSRGLCLVPLSCLSYLADGGGAGGGLWQQPDFGGASL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1184 386 CDD bHLH_AtbHLH_like 269 317 IPR045239 -
Alju08g1184 386 Gene3D - 253 333 IPR036638 GO:0046983
Alju08g1184 386 FunFam Transcription factor bHLH123 family 270 332 - -
Alju08g1184 386 MobiDBLite consensus disorder prediction 1 17 - -
Alju08g1184 386 MobiDBLite consensus disorder prediction 1 54 - -
Alju08g1184 386 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 271 322 IPR036638 GO:0046983
Alju08g1184 386 MobiDBLite consensus disorder prediction 18 54 - -
Alju08g1184 386 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 95 363 - -
Alju08g1184 386 SMART finulus 270 315 IPR011598 GO:0046983
Alju08g1184 386 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 260 309 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1184 Alju-ChrAlju08 8897322 8901379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1184 18 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 35.610 1.29e-52 179