Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1125 ATGGTTTCGAAACACTTACAAAAACTATCTACAGTTTCTCCTACCAAGTTCACTGCCTCTCAGTCACACCCAGTAATGAGAAGCTTAACACCATTCCCAGACCTTTCCTTGAACATTAGCCCTCCAGTTTGTGAAGCCAAACAAGTTGTTGGGAGTCACACTAAAACGCCTCATCATCATCATCATCATCACAGCGAAATGTGTTCCACCTCCGATTCTGGGAGCAGTGAGAGTGATTTAAGCCATGAAAATGCCTTCTCACGCCTTGGCTATCATCCTCATAATCGTGAGCCTACTTTGAGCTTAGGCATCAAAATGGAAGATTTGAATCCCCTTAATAATCCTCTCCCAGCAAGAAACGTGATTAATCACTTTCACAACCCCCAACCTCACATCTATGGCCGCGACTTTAAACGAAATAAAACCAGAGTCCTCTCTGGTGGTGGTATTAAAAGAAGCATCAGAGCTCCTAGAATGCGATGGACTACAACCCTACATGCCCATTTTGTTCACGCTGTTCAGCTTCTTGGCGGCCATGAAAGGGCTACTCCAAAGTCGGTGTTAGAGCTGATGAATGTAAAAGATTTAACCTTAGCCCACGTTAAGAGTCATTTACAGATGTATAGAACAGTGAAGAGCACTGCCAAATGTACAGGTCATGGCCACACTGATATGGGCTTATCCGTTGCCGATGAACATGGAACCAAAGCTTGTGAGAGAACCCATCTAACTCCGCCGCTTCAAAAATCTCACAGCAACAAGGAATCAGGGCAATCATCAACGGAGACGGGGACAAACGAGAGTAGACAAAAACCAGGAACGAGTTTGACGTATGCTCAAGTGAAGGCAAATGAAAGCATGGTGGCTGGAGGGTCATTGTCAGATTCTTCAGATGAGACGCTTAACCTAGAATTCACCCTTGGAAGACCCAGTTGGAACACACAGCAGCCTCAATCATCAACAGACTTTACTCTTCTCAACTGTTAA 987 0.4478 MVSKHLQKLSTVSPTKFTASQSHPVMRSLTPFPDLSLNISPPVCEAKQVVGSHTKTPHHHHHHHSEMCSTSDSGSSESDLSHENAFSRLGYHPHNREPTLSLGIKMEDLNPLNNPLPARNVINHFHNPQPHIYGRDFKRNKTRVLSGGGIKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTAKCTGHGHTDMGLSVADEHGTKACERTHLTPPLQKSHSNKESGQSSTETGTNESRQKPGTSLTYAQVKANESMVAGGSLSDSSDETLNLEFTLGRPSWNTQQPQSSTDFTLLNC 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1125 328 MobiDBLite consensus disorder prediction 242 274 - -
Alju08g1125 328 MobiDBLite consensus disorder prediction 49 81 - -
Alju08g1125 328 MobiDBLite consensus disorder prediction 245 274 - -
Alju08g1125 328 MobiDBLite consensus disorder prediction 1 22 - -
Alju08g1125 328 SUPERFAMILY Homeodomain-like 154 211 IPR009057 -
Alju08g1125 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 157 210 IPR006447 GO:0003677
Alju08g1125 328 Pfam Myb-like DNA-binding domain 158 209 IPR001005 -
Alju08g1125 328 Gene3D - 156 213 - -
Alju08g1125 328 MobiDBLite consensus disorder prediction 308 328 - -
Alju08g1125 328 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 33 315 IPR044847 GO:0000976|GO:0006355|GO:0010158
Alju08g1125 328 FunFam Myb family transcription factor 155 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1125 Alju-ChrAlju08 8429774 8433449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1125 21 224 G2-like Transcription Factor Family AT5G42630 52.381 1.76e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju08g1125 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2791 07 53277373 53279668 Alju08g1125 08 8429774 8433449 CCT
Alju08g1125 08 8429774 8433449 Alju08g1125 08 8429774 8433449 ECH