Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1121 ATGGCTATCCGAGTTACTTTATCCTATTCTGGCTACTTTGCCCAGGGCCTGGCTTCCGCCGGTTGTCGTGCGGGGAATTCGCGTTCCCTCCACGAATGCTGGGTCCGGTCTCGTTTGTTCGGCCCTTTCCAGAAACCTGATCGTGATCCCTCCGGAGGCGTGCGTAACTACCGTTCCGATTACGGGCGGACTAAACCGAATTGCTGGGCTAAGAATTCAGCCTCTTTGTATTCTACTCTCTCCAAAGAATTTCTGGGGGATAATTCTGATAATCCGATCATATTGGGTTTGATTTCGCTATTGAAGCCAACCGGTTCGGTATCGGCGTCTATGGCTGTATCTGGTGTTTCCCCGATTAACGCCTCTTCGATTGTCCCCTTTTTAAGGGGATCGAAGAGCCTTCCTAGTAACGAGTCAACTCCCGTTCCTGCAATTCTTGAGGTGGATAAAGGAGGGACGCTATGTTATAATGGCGGTGATGATGCGAATTCAGGTTACAATCCCGAAGGTCTTGAGAAGTCAAACTGGCTATCGCGCTTGTTGAACGTCTGTTCAGAGGATGCGAAGGCTGTGTTTACTGCTGTGACTGTTAGTGTGCTCTTTAAGTCGTTCTTGGCTGAGCCGAGATCGATCCCCTCGGCTTCTATGTACCCAACTCTGGACGTGGGTGACAGAATTTTAGCGGAGAAGGTTTCATTCCTTTTCCGAAAGCCTGATGTTTCAGATATTGTCATTTTTAAAGCACCTCCAAGTTTACAGGAAAAAGGTTTTAGTTCGGCTGATGTATTTATTAAGAGAATTGTGGCAAAAGCTGGGGACTGTGTGCAGGTTCTTGATGGAAAATTGCTGGTGAATGGTGTCACTCAGGAAGAAGAATTCGTTTTAGAGCCCCTTTCTTATGAGATGGATCCAGTGGTTGTGCCAGAAGGTTATGTCTTTGTGTTGGGTGACAATCGTAATAATAGCTATGACTCTCATAACTGGGGTCCGCTTCCTATAAAGAACATTATGGGTAGATCCATGCTTCGGTACTGGCCTCCTTCTAAAGTATCTGACACCCTTTATAAATCACCAAGTGCAAACAATTCTCTGGCTGTTTCTTGA 1104 0.4665 MAIRVTLSYSGYFAQGLASAGCRAGNSRSLHECWVRSRLFGPFQKPDRDPSGGVRNYRSDYGRTKPNCWAKNSASLYSTLSKEFLGDNSDNPIILGLISLLKPTGSVSASMAVSGVSPINASSIVPFLRGSKSLPSNESTPVPAILEVDKGGTLCYNGGDDANSGYNPEGLEKSNWLSRLLNVCSEDAKAVFTAVTVSVLFKSFLAEPRSIPSASMYPTLDVGDRILAEKVSFLFRKPDVSDIVIFKAPPSLQEKGFSSADVFIKRIVAKAGDCVQVLDGKLLVNGVTQEEEFVLEPLSYEMDPVVVPEGYVFVLGDNRNNSYDSHNWGPLPIKNIMGRSMLRYWPPSKVSDTLYKSPSANNSLAVS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1121 367 FunFam Peptidase/ serine-type peptidase 213 344 - -
Alju08g1121 367 ProSitePatterns Signal peptidases I signature 3. 312 325 IPR019758 GO:0004252|GO:0016020
Alju08g1121 367 ProSitePatterns Signal peptidases I serine active site. 213 220 IPR019756 GO:0004252|GO:0016020
Alju08g1121 367 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Alju08g1121 367 PANTHER SIGNAL PEPTIDASE I 140 352 IPR000223 GO:0006508|GO:0008236|GO:0016020
Alju08g1121 367 NCBIfam signal peptidase I 190 346 IPR000223 GO:0006508|GO:0008236|GO:0016020
Alju08g1121 367 Pfam Signal peptidase, peptidase S26 188 345 IPR019533 GO:0004252|GO:0006465
Alju08g1121 367 SUPERFAMILY LexA/Signal peptidase 203 351 IPR036286 -
Alju08g1121 367 CDD S26_SPase_I 207 339 IPR019533 GO:0004252|GO:0006465
Alju08g1121 367 Gene3D Umud Fragment, subunit A 201 360 - -
Alju08g1121 367 PRINTS Bacterial leader peptidase 1 (S26A) family signature 204 220 IPR000223 GO:0006508|GO:0008236|GO:0016020
Alju08g1121 367 PRINTS Bacterial leader peptidase 1 (S26A) family signature 307 326 IPR000223 GO:0006508|GO:0008236|GO:0016020
Alju08g1121 367 PRINTS Bacterial leader peptidase 1 (S26A) family signature 263 275 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1121 Alju-ChrAlju08 8404338 8406599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1121 216 346 MADS-box Gene Family AT1G29960 35.338 3.89e-16 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1121 08 8404338 8406599 Alju08g1121 08 8404338 8406599 ECH