Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1090 ATGTCAACCAAGAGTGAACACCATACGGTTCCCCTTTCGGTGCTCCTGAAGCGTGAATCAGCAAGCGAGAAAATTGAAAAACCTGAAATTCAGCATGGTCAAGCAAGCCAGAGCAAAAAGGGAGAGGACTTCACGCTACTAAAAACTGAATGCCAGAGGGTGCTGGGGGACGGGGTGTCGACATATTCTGTTTTCGCACTATTTGATGGACACAAAGGATCTGCTGCCGCTGTTTATGCCAAGGAGAATCTCCTAAATAATGTTTTAAGTGTGATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCTTTGCCTAGGGCTTTAGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGACAGGCTTAAGTTCCACCTGGGATTCTGCATATGTATATAGTGGATCTATTGAGGAGTACTTGTCCAACTCTGCTGTTTGCAAGGTTATATTTTTCACATGTCAAACATCAGGAACAACTGTGACCTTTGTGATTATAGAAGGATGGGTTGTTACGGTTGCATCTGTTGGTGATTCCCGATGCATACTTGAACCCTCTGAAGGTGGTCTTTATTACCTATCAGCAGATCATAGGCTAGACACCAATGAAGAGGAGGTAACACGTATAACGAGTAGTGGGGGTGAGGTTGGTCGGCTAAATACTGGTGGTGGTGCAGAGCTGTCCACATCCGGAGGCAGACTTATCATCTGCAGTGATGGTGTTTGGGATGCTCTATCTTCAGAAACAGCCCTTGATTGTTGTCGTGGGATGTCACCAGAGGTTGCAGCACCGCATATCGTTAAAGAAGCGGTACATGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTATTGATATTTTGCCCCCTGAGAAACCACCTGCTCCCCCTTTGACATATGCTAAGAGACCAATGAAAGGAATGTTTAAATCCGTGTTTCGGAGGAAGTCTGCAGAATCATCTTCCTATAATGAAAAAGATTATATGGAGCCTGATGTGGTAATGGAGCTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGATTAGATACAAAATATCCCCTCTGCAACATGTTCAGGTTGTTTACATGTGCAGTCTGTCAAGTTGAGATGAAGCCTGGGGAGGGCATATCAATACACGAAGAGGCATCCAACCCAGGAAAATTGCGTCCCTGGGATGGTCCGTTCCTTTGCCGAAGTTGCCAAGACAAAAAAGAAGCCATGGAAGGGAAAAAGAAAAATAGGTGA 1254 0.445 MSTKSEHHTVPLSVLLKRESASEKIEKPEIQHGQASQSKKGEDFTLLKTECQRVLGDGVSTYSVFALFDGHKGSAAAVYAKENLLNNVLSVIPSDLNRDEWIAALPRALVAGFVKTDKDFQETGLSSTWDSAYVYSGSIEEYLSNSAVCKVIFFTCQTSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGLYYLSADHRLDTNEEEVTRITSSGGEVGRLNTGGGAELSTSGGRLIICSDGVWDALSSETALDCCRGMSPEVAAPHIVKEAVHAKGLRDDTTCIVIDILPPEKPPAPPLTYAKRPMKGMFKSVFRRKSAESSSYNEKDYMEPDVVMELYEEGSAMLSERLDTKYPLCNMFRLFTCAVCQVEMKPGEGISIHEEASNPGKLRPWDGPFLCRSCQDKKEAMEGKKKNR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1090 417 Gene3D - 31 294 IPR036457 -
Alju08g1090 417 SMART PP2C_4 21 287 IPR001932 -
Alju08g1090 417 MobiDBLite consensus disorder prediction 1 38 - -
Alju08g1090 417 ProSiteProfiles PPM-type phosphatase domain profile. 24 289 IPR001932 -
Alju08g1090 417 SUPERFAMILY PP2C-like 38 289 IPR036457 -
Alju08g1090 417 PANTHER PROTEIN PHOSPHATASE 24 221 IPR015655 GO:0004722|GO:0006470
Alju08g1090 417 Pfam Protein phosphatase 2C 53 220 IPR001932 -
Alju08g1090 417 CDD PP2Cc 39 289 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1090 Alju-ChrAlju08 8174855 8179275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1090 1 414 PP2C-type Phosphatase Gene Family AT1G47380 66.372 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1869 07 45018087 45022372 Alju08g1090 08 8174855 8179275 CCT
Alju08g1090 08 8174855 8179275 Alju08g1090 08 8174855 8179275 ECH