Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1063 ATGACAAACTATGCGTTTCTGAACGATCAGCTTTCGGCGCACACCTCAATTTTCGGGTTACGACTGTGGGTTGTGCTGGGCATATGCGTAGGAGCAGCCATAGTTATTGTTCTGTTTCTCATATCTCTCTGGTTCACCAAGCGCAACAAGAATTCTTCCAACCACAACTCTTCACACAATCCTACCATTCCAAATGTCTCCAAGGAGATCCAGGAAATCAGGATTGACCCGACCCATGGAAGGTCCGACTCGTATCCGGAAGCAGAGGCGGAGGGGGATAAGGCCCAAGCCATGCTCGTTCAGCAGCAGGGGGGTGATAGCCAAAGAATTCACATAGAGATTGGTAAAGATCACCGGATTTCGTATCCTGAGAAGGGCGGTGGTTCATCTCATGGAAGTGGCGAGCAGGGTTCAATTTCTGTGCCTGAGGTTTCTCATTTGGGATGGGGCCATTGGTACACTCTCAGAGAGCTTGAGGTCTCTACCAACGGGTTTGCCGACGAGAACGTCATAGGTGAAGGTGGCTACGGAATTGTTTATCGCGGGGTGTTGGAAGATGATACCGAAGTTGCGATTAAAAATTTGCTGAATAACAGGGGACAAGCTGAGAGGGAATTTAAGGTAGAAGTTGAAGCAATTGGACGTGTTCGGCATAAGAATTTGGTGAGGTTACTTGGATATTGTGTTGAAGGAGCCCATCGGATGCTTGTGTACGAGTATGTTAACAATGGAAACCTAGAACAGTGGCTTCACGGAGATGTTGGGCCTTCTAGCCCTCTGACATGGGAGATTCGCATGAATACAATACTTGGAACAGCAAAAGGGTTGACTTACCTTCATGAGGGACTTGAACCTAAGGTGGTTCACCGTGATATCAAGTCAAGCAACATATTGCTAGATAAGCAATGGAATCCAAAAGTCTCTGATTTTGGCCTTGCAAAGCTCTTGGGATCAGAGAGAAGTTATGTGACAACCCGAGTAATGGGAACATTCGGGTATGTAGCTCCAGAATATGCAAGTACTGGCATGTTAAACGAAAGAAGTGATGTGTACAGCTTTGGTGTTCTTATCATGGAGATAATTTCTGGAAGAAACCCGGTAGATTACAGCCGGCCTCCTGGAGAGGTGAACCTGGTTGAGTGGCTGAAGTCCATGGTTGCTAATCGGAATGCAGAGGCGGTGCTCGATCCTAGGCTACCTGAGAAGCCTTCTTCAAGGGCACTGAAGCGTGCTTTATTAGTAGCTTTGAGATGTGTGGATCCAAATGCCCAGAAAAGGCCAAAGATGGGGCATATCATACATATGCTTGAAGCTGATGAGTTCCCTTTTCGAGATGATCGAAGAACTGGAAGGGAAAATGGACGCTCCCAGAGGATGAGCACAGGAGAAGGGTTGAAGGATAAGCAAGTATGTGAATCAGGTGACAGTAGTGGATATGAAAGTAGTATCCAAACTAGCAAGTCAATGGGCAGAAACCAAGAAACCGAAGAGCAATAG 1497 0.4683 MTNYAFLNDQLSAHTSIFGLRLWVVLGICVGAAIVIVLFLISLWFTKRNKNSSNHNSSHNPTIPNVSKEIQEIRIDPTHGRSDSYPEAEAEGDKAQAMLVQQQGGDSQRIHIEIGKDHRISYPEKGGGSSHGSGEQGSISVPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYRGVLEDDTEVAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVNNGNLEQWLHGDVGPSSPLTWEIRMNTILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLIMEIISGRNPVDYSRPPGEVNLVEWLKSMVANRNAEAVLDPRLPEKPSSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEADEFPFRDDRRTGRENGRSQRMSTGEGLKDKQVCESGDSSGYESSIQTSKSMGRNQETEEQ 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1063 498 SUPERFAMILY Protein kinase-like (PK-like) 146 437 IPR011009 -
Alju08g1063 498 ProSiteProfiles Protein kinase domain profile. 165 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1063 498 FunFam Putative receptor-like serine/threonine-protein kinase 241 451 - -
Alju08g1063 498 MobiDBLite consensus disorder prediction 474 491 - -
Alju08g1063 498 SMART serkin_6 165 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1063 498 MobiDBLite consensus disorder prediction 444 498 - -
Alju08g1063 498 Pfam Protein kinase domain 166 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1063 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Alju08g1063 498 Gene3D Phosphorylase Kinase; domain 1 141 240 - -
Alju08g1063 498 CDD STKc_IRAK 171 437 - -
Alju08g1063 498 Coils Coil 185 205 - -
Alju08g1063 498 Gene3D Transferase(Phosphotransferase) domain 1 241 448 - -
Alju08g1063 498 MobiDBLite consensus disorder prediction 121 140 - -
Alju08g1063 498 FunFam Probable serine/threonine-protein kinase At1g01540 145 240 - -
Alju08g1063 498 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524
Alju08g1063 498 PANTHER OS01G0323000 PROTEIN 3 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1063 Alju-ChrAlju08 7995897 7998214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1063 24 457 Trihelix Transcription Factor Family AT5G38560 38.009 1.18e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Alju08g1063 Pkinase 2.8e-46 CL0016