Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1058 ATGGAAGAGCCTCAATGCTCCAGAGCTACTTTGCCTGCCTCACTCCCACCTGGTTGCCGTTTCTATCCTTCCAAAGAGCAGTTGCTCTGTTACTATTTACCCAACAAGAACGCCGGCGGAAATTTCCATGGCTGCGATCTGATCAGGGAGCTTGACCTGTACGATTATGATCCTTTCCAATTACCTGAAATTGCGTGCTTTTCCTATGGTTATCGCGGAAGGAAGAAGCATTGGTACTGTTACACTGCCAGGGTTTTGAAGGATTCTAGAAGGAAGACTAGGATGGTCAAGAGCGGGTATTGGATGAGAAAGGGAGGGGTTGGGAATGTTTTCAATGGCGGTGGGAATGTCGTCTTGGGCACCAGGACCTCTTTCGTTTTTTATCTGGGGAATTCCCCCAAGAAAGCAAACCGGACGAATTGGATGTTGCATGAGTATGCATTAGTCGATCATCTAAAGGCTTCATTTGTTATTTGTCGAGTATTCTGTAAAGCACATCATAAGAATAGTGTGTCAGAGAATGGTCTGAGTTCCTGCGCAGAGGAAGGTTTCTCAGACATTGGCATTCAGCATAATGGATATTTTTCACCCGATATAGTTAAGACTCAAATGCGTGGTGACTGCGCCATTGGTAGAAAGATTTCAGTGTCTCCCTTGAAACCTGCTAGTGAACTAGATGAGAATCAAATTGCAGCTGCATCAGCTTCTGTTGCTACTTTCCACTGTAGTGCAGGTCCTCAAGACAGTCAAACGGGAAAGTTTTCTGGACTTCCTGGTGATGGTGCAATATTTGTTCAGGAATTGGCATCTCAGCAACATTTACTTTCGATTCTAGAGGAGGATTTCATAGAGTTGGATGATTTAGCTTGA 870 0.4471 MEEPQCSRATLPASLPPGCRFYPSKEQLLCYYLPNKNAGGNFHGCDLIRELDLYDYDPFQLPEIACFSYGYRGRKKHWYCYTARVLKDSRRKTRMVKSGYWMRKGGVGNVFNGGGNVVLGTRTSFVFYLGNSPKKANRTNWMLHEYALVDHLKASFVICRVFCKAHHKNSVSENGLSSCAEEGFSDIGIQHNGYFSPDIVKTQMRGDCAIGRKISVSPLKPASELDENQIAAASASVATFHCSAGPQDSQTGKFSGLPGDGAIFVQELASQQHLLSILEEDFIELDDLA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1058 289 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
Alju08g1058 289 Pfam No apical meristem (NAM) protein 16 148 IPR003441 GO:0003677|GO:0006355
Alju08g1058 289 SUPERFAMILY NAC domain 11 164 IPR036093 GO:0003677|GO:0006355
Alju08g1058 289 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 219 - -
Alju08g1058 289 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1058 Alju-ChrAlju08 7979254 7981846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1058 14 188 NAC Transcription Factor Family AT1G52890 36.757 9.59e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju08g1058 NAM 1.1e-23 No_clan