Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1057 ATGATGCAGCAGTCGTCCACCATGGGAGGCATGAAGGTGCATCACTTGGCACGTGCACTCACGTGGGAGAACGAACCCTCCCTCACCCTTGGCTTCAAACGCTTACGCCCTCTCGCTCCAAAGCTCCACACCAACACTCAAACTTCTCATTCTCTTTCTTCTTTGGATCTCAACTCCTTCATCAGACCCGATAGTGGCCCCAGAAAGCTCCCTTCCCCTCGCCACCACCAACAACCAGATTCACCACCCCAGGTGGAAACGCACCCGGGAGGAACGAGGTGGAATCCGACGCAGGAACAGATTGGGATATTGGAGATGCTGTACAGAAGTGGAATGCGAACTCCCAATGCTGAACAGATCCAGCACATCACTGCTCAGCTTGCCAAGTACGGCAAGATCGAAGGCAAGAATGTCTTCTATTGGTTCCAAAACCACAAAGCCCGCGAAAGACAAAAGCTGAAACGCATCCCTAATTCTAGTTCTCCTGCTTCTCCTCCTCCCCCTCCTCCACCAACCATTGCCTTCCCTTTAACTTTACAGACAATGGGCCAAGTAGTAGAAGGAGAGGGAGATAGCCCGTTGAGGAAGAAGTGTAGGAGCTTGGCTTTTGAGTGTTTTCAATTAGAAGAAAGCAGATTGTTACGTAGAGATGATGTGCAGGAATATAAAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 708 0.5056 MMQQSSTMGGMKVHHLARALTWENEPSLTLGFKRLRPLAPKLHTNTQTSHSLSSLDLNSFIRPDSGPRKLPSPRHHQQPDSPPQVETHPGGTRWNPTQEQIGILEMLYRSGMRTPNAEQIQHITAQLAKYGKIEGKNVFYWFQNHKARERQKLKRIPNSSSPASPPPPPPPTIAFPLTLQTMGQVVEGEGDSPLRKKCRSLAFECFQLEESRLLRRDDVQEYKTLELFPLHPEGR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1057 235 Gene3D - 91 156 - -
Alju08g1057 235 FunFam WUSCHEL-related homeobox 4 91 158 - -
Alju08g1057 235 Pfam Homeodomain 92 151 IPR001356 GO:0003677
Alju08g1057 235 ProSiteProfiles 'Homeobox' domain profile. 87 152 IPR001356 GO:0003677
Alju08g1057 235 PANTHER WUSCHEL-RELATED HOMEOBOX 4 11 235 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Alju08g1057 235 MobiDBLite consensus disorder prediction 153 172 - -
Alju08g1057 235 MobiDBLite consensus disorder prediction 44 60 - -
Alju08g1057 235 SUPERFAMILY Homeodomain-like 86 155 IPR009057 -
Alju08g1057 235 SMART HOX_1 89 156 IPR001356 GO:0003677
Alju08g1057 235 MobiDBLite consensus disorder prediction 79 96 - -
Alju08g1057 235 MobiDBLite consensus disorder prediction 44 96 - -
Alju08g1057 235 CDD homeodomain 92 152 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1057 Alju-ChrAlju08 7970433 7971505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1057 11 155 Wox Gene Family AT1G46480 60.510 2.17e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju08g1057 Homeodomain 4.7e-19 CL0123