Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1055 ATGAACACTCTATCACTCTGTTACGCAACGGACCCCACCCCTTCACTTTTCCTTCGCAACCTCAGCTCACAAAGGAGCCTTCATTCCTGCTCGTCTCTCAATTTCAGAAATGCAGTGTCACTTGCAATCTCATCAAAATCCCCACTTCAAAGTTTGCCTTTTCGCCGATGGCTTACCAGAGCCTGCTCCGCCGCAACTTCTGAAATCAACATGGTTAAGAATAAGGAAGGTATTTACGCCCCCAAACAGAATAAAGTCGTAGTCTTATGGGACCTTGATAACAAACCCCCTCGCGGACCGCCATATCAGGCTGCCATGGCACTCAAGCAGGTGGCACAGCGCTTCGGTGACGTTGTCGACATGTCTGCATACGCCAATCGGCACGCATTTATCCACTTACCCCAATGGGTTCTCCACGAACGCCGTGAACGGAAGCAAATAGACATTATGGAGCGTAAAGGAATGATCACGCCTTCTGAGCCGTACGTTTGTGGGGTTTGTGGCCGCAAGTGTAAAACTAATTTAGACCTCAAGAAGCATTTCAAGCAGCTCCATGAGCGAGAGCGTCAGAAAAAGCTGAATCGGATGAGGTCACTTAAGGGGAAAAAGCGTCAGCGTTATAAAGAGAGGTTCATATCTGGGAATCACAAGTACAATGAGTCAGCAAGGTCTTTGATTACCCCTAAGGTGGGATTTGGGCTCGCATCCGAACTAAGGCGTGCCGGAGTATTTGTGAAGACGGTGGAAGATAAACCGCAAGCAGCTGATTGGGCACTGAAGAGGCAGATGCAACACTCAATGAGCCGAGGGATAGATTGGTTGTTTTTGGTGTCCGACGATTCAGATTTTTCGGAGATGTTGAGGAGGGCGAGAGAGGCAAATTTGGGAACGGTAGTTGTGGGTGACTGGGACAGGGCATTAGGACGGCACGCCGACTTATGGGTTCCTTGGATTGGAGTTGAGAATGGTGAGCTTCCAGAGACAGATTTAGTACCCAAGAACAGAAGAAGAGAGTCTTTTGCTAAAGATGATGGTTTGTTTTCAGTATCCCATGACGATGGAGATACTGTTATTACGAGCGATTTGGATGGAATAGTAGATGAGCTTGTTGCAATGAGAACCGAGTTTAATGATCTTAGAAATGCAACATTCTCGGATGAGGATGAGGAACAAGGGTGGGTTTCGGAAGAACTGGATGAAAATTATATACTAGTGGTTGATGAGGATGAGGAAACAGAAGATGAGTTTTATTGA 1254 0.4697 MNTLSLCYATDPTPSLFLRNLSSQRSLHSCSSLNFRNAVSLAISSKSPLQSLPFRRWLTRACSAATSEINMVKNKEGIYAPKQNKVVVLWDLDNKPPRGPPYQAAMALKQVAQRFGDVVDMSAYANRHAFIHLPQWVLHERRERKQIDIMERKGMITPSEPYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFISGNHKYNESARSLITPKVGFGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWLFLVSDDSDFSEMLRRAREANLGTVVVGDWDRALGRHADLWVPWIGVENGELPETDLVPKNRRRESFAKDDGLFSVSHDDGDTVITSDLDGIVDELVAMRTEFNDLRNATFSDEDEEQGWVSEELDENYILVVDEDEETEDEFY 417
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1055 417 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 49 361 - -
Alju08g1055 417 CDD PIN_LabA-like 172 302 - -
Alju08g1055 417 ProSiteProfiles Zinc finger C2H2 type domain profile. 162 190 IPR013087 -
Alju08g1055 417 ProSitePatterns Zinc finger C2H2 type domain signature. 164 185 IPR013087 -
Alju08g1055 417 Gene3D - 79 317 - -
Alju08g1055 417 Coils Coil 182 202 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju08g1055 Alju-ChrAlju08 7945941 7947194 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1055 21 399 C2H2 Transcription Factor Family AT5G52010 62.887 1.82e-172 486
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju08g1055 None None None