Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1050 ATGCTTAAACAAGATCATTTATCACTTCTGCTTCAAGTTCAAAACTTGCCGTTATTTTTGTCTTCTTTCCTGTTATTTTTACTCTGCTCCTTTGTTGCTCCTTCTAGGCCGCTCCTGCATCATCCTCCACCTGCATTTCCTCTGCTCTTACCTCCTGATGCGGCTGCATTATTGTCATTCAAATCCAAAGCTGATCTCAACAATCACCTCCTTTTCTCTCCTAACACCTCCGCAGATGCTTTCTGCAAATGGCAAGGTGTTCAATGCAATGCAAAGCTGAAAGTGGAGCGTCTTGTTCTTCAAGGTTTAGATCTCGGAGGTATTTTCGCTCCAAACACATTGTCTCTTCTTGACCAGCTCCGACTGCTCAGTTTGCAGAACAACTCTCTCGTCGGACCAATCCCTGATCTCTCCGGTCTTCACAACCTCAAGGGCCTCTTCCTTGATAGTAACCGCTTCACGGGTTCTTTTCCTCCTTCGATCCTCACACTTCACAGGCTTCGCACGTTGGATTTCTCTCACAACAATCTCACAGGGCCCATCCCCACCAACTTAACCAAGCTAGACCGTTTCTATTACCTTCGTCTCAGCTGGAATAGATTCAATGGCTCCATCCCTCCTTTCAATCAGTCCGCTCTCCGAACATTCGACTTCTCTGGTAACAACTTTTCCGGTCCTATTCCTGTCACGGTCACTTTAGTCCGTTTTGGACCCTCCCCCTTCTCTCAAAACCCAGGCCTCTGCGGCGAAATCATCCACAAAGAATGCCATCCAAGCGCACCTTTCTTTGCACCAGCAGCACCGATCAAGGCATCGCCGCCGGCGGTACAGCTTGGTCAGAGCGCCCAGGTCCACGGGGTTGACGGGTTTGTTCGTACACCCTGCAAGAAAACACACAACGGGAACGCCGTTATTATTGGGTTCTCCGCAGCGGTTTGCGTTCTCATCGCTTCGCTTGTCTGTTTCGTGGTGGCCTTCAGGAGACAGGGAGAGAAGGAGTCTTCGAGGACTCTAATGGATTCTGATGGGGCGGCGACGGCAGAAGCGGTGGCGGTGATGCAAATGGAGCAAGAGAAGGAATTGGAGGAGAAGGTGAAGAAGGTGCAGGAGATGCAAGTGGGGAAGAGTGGGAGCTTAATGTTCTGTGCGGGAGAGGCGCAGCTTTATACGCTGGACCAGCTAATGAGAGCCTCGGCGGAGATTTTGGGCAGGGGATCGCTGGGGACCACGTACAAAGCGGTGTTGGATAACCGTTTGATCGTCACTGTGAAGCGCCTTGATGCTGCTAAAATGGCTTCAGACTCAACCAAGGAAATCTTCGATAGTCACATGGAATCAGTAGGTGGTCTTCGCCACCCCAATTTGGTTCCCCTTAGGGCCTATTTTCAGGCCAGGGAAGAGAGGCTTCTCATCTATGATTACGAGCCTAATGGCAGTCTTTTCTCCCTCATACACGGTTCAAGATCAAGCAGGGCAAGGCCGTTGCACTGGACATCGTGTTTGAAGATAGCAGAGGACGTAGCACAAGGACTGTCCTACATCCACCAAGCCTGGAGACTAGTGCATGGCAATCTCAAGTCCTCCAACGTTTTGCTTGGCCCTGATTTTGAAGCCTGCATCACTGACTACTGTCTCTCCATGTTGGCCAACCCTTCCAGCTTCAACGATGACCCGGATTCAGCTGCGTGCAGGGCACCCGAGACCTGTAATCCGAACCACCAGCCAAGTCCCAAATCTGATGTTTACGCTTATGGTGTTTTGTTGCTGGAACTTTTAACGGGGAGGCCTCCTTCAGAACACCCTTTCTTGGTGCCCACTGATAGGGTGAGTTGGGTGAAATCTGTGCGGGGAGATAATGGAGGCGAAGATAACAGAATGGGCATGCTTGTTGAGGTTGCCACCACCTGTAGCTTGACCTCTCCTGAGCAGAGACCCACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATTAAAGAGATTGTATTATTGGAGGATAGGGCATTAGACCTACGCACCACCGCCTCTTAA 2028 0.5049 MLKQDHLSLLLQVQNLPLFLSSFLLFLLCSFVAPSRPLLHHPPPAFPLLLPPDAAALLSFKSKADLNNHLLFSPNTSADAFCKWQGVQCNAKLKVERLVLQGLDLGGIFAPNTLSLLDQLRLLSLQNNSLVGPIPDLSGLHNLKGLFLDSNRFTGSFPPSILTLHRLRTLDFSHNNLTGPIPTNLTKLDRFYYLRLSWNRFNGSIPPFNQSALRTFDFSGNNFSGPIPVTVTLVRFGPSPFSQNPGLCGEIIHKECHPSAPFFAPAAPIKASPPAVQLGQSAQVHGVDGFVRTPCKKTHNGNAVIIGFSAAVCVLIASLVCFVVAFRRQGEKESSRTLMDSDGAATAEAVAVMQMEQEKELEEKVKKVQEMQVGKSGSLMFCAGEAQLYTLDQLMRASAEILGRGSLGTTYKAVLDNRLIVTVKRLDAAKMASDSTKEIFDSHMESVGGLRHPNLVPLRAYFQAREERLLIYDYEPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSMLANPSSFNDDPDSAACRAPETCNPNHQPSPKSDVYAYGVLLLELLTGRPPSEHPFLVPTDRVSWVKSVRGDNGGEDNRMGMLVEVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDRALDLRTTAS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1050 675 Coils Coil 351 371 - -
Alju08g1050 675 ProSiteProfiles Protein kinase domain profile. 396 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1050 675 Gene3D Transferase(Phosphotransferase) domain 1 476 667 - -
Alju08g1050 675 Gene3D Ribonuclease Inhibitor 52 210 IPR032675 -
Alju08g1050 675 Gene3D Ribonuclease Inhibitor 211 258 IPR032675 -
Alju08g1050 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 658 IPR046959 -
Alju08g1050 675 SUPERFAMILY Protein kinase-like (PK-like) 400 659 IPR011009 -
Alju08g1050 675 Pfam Protein kinase domain 399 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1050 675 SUPERFAMILY L domain-like 51 230 - -
Alju08g1050 675 Gene3D Phosphorylase Kinase; domain 1 348 474 - -
Alju08g1050 675 Pfam Leucine rich repeat N-terminal domain 51 90 IPR013210 -
Alju08g1050 675 FunFam Nuclear pore complex protein NUP107 51 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1050 Alju-ChrAlju08 7921055 7924482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1050 15 665 Receptor kinase-like Gene Family AT5G43020 57.079 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju08g1050 Pkinase 5.4e-30 CL0016