Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1018 ATGAGCTGCAACGGTTGTCGAGTCCTCAGGAAGGGATGCAGCCAAGACTGCGCGCTCAGGGCTTGCCTCCGGGGGATCCATTCCCCTCACTCCCAGGCCCACGCCACTCTCCTCCTCGCCAAATTCTTCGGCCGCACCGACCTCTTCTCCTTCATTTCTTCCGTTCCCCTCTCCACCAGACCAGCCTTGTTTCGGTCTCTGCTGTACGAAGCGTGCGGGCGAATAGTGAATCCCGTGAGCGGCGCCGTCGGACTCCTGTGGAGTGGTAACTGGCACTTATGCGAGGCAGCCGTGCAGACGATACTCGCCGGCGGTGTTCTTCAGCCGCTACCGGAGACTTTCGATGGAGTTCTGCGACCGATCCTGGATGAGTCATCTCCTGACATTGGGAAAAATGTGCGCTCTCAGCTCCGGCCATTCATGCATGAACTCGGAAAGAAGGAGCAGAAGTCGACCTTGGATCTCTCCCTGCTTCCCGGGACAGGGAGGAGGCAGAGTAATCCGTTGGTTTCTGCTGAATCGGAAATGAGAAGCTGTGGCGGTTGCGGAGCCGAGAAGAATATTAAGCTTTTGAATCTGTTTGCGTAA 588 0.5697 MSCNGCRVLRKGCSQDCALRACLRGIHSPHSQAHATLLLAKFFGRTDLFSFISSVPLSTRPALFRSLLYEACGRIVNPVSGAVGLLWSGNWHLCEAAVQTILAGGVLQPLPETFDGVLRPILDESSPDIGKNVRSQLRPFMHELGKKEQKSTLDLSLLPGTGRRQSNPLVSAESEMRSCGGCGAEKNIKLLNLFA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1018 195 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Alju08g1018 195 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Alju08g1018 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1018 Alju-ChrAlju08 7711382 7712042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1018 1 126 AS2 family AT3G49940 64.122 7.30e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju08g1018 LOB 1.1e-23 No_clan