Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1014 ATGGGAACAGACAGTCCGGCCAATTACGCCTACATGGGACGGAGTCTCAGCGAATTGAGTATCAACGATAGTTCTTCCTCTGCTTTCAGCGATTGTAACAGTGATAGATCTGGTGAATTCCCTACTGCTTCTTCCCAGAGCCGCCGTCTTCTTATCGCCTGCGCTGCTGAGAATTCCGATGATTTTATTCGCCAGCTTGTCTCCGATCTCCATTCCACTTCTGTTGACGAGCAGAAGCAAGCCGCCTTGGAGATCAGATTGCTCGCCAAGAATAAACCAGAAAATCGCCTCAAAATCGCCGAGGCCGGCGCAATTAATCCCTTAATCTCGCTTATATCTTCCCCTGACCTTCAGCTCCAAGAGTATGGCGTCACCGCTATTCTGAATCTTTCCTTATGTGACGAGAAAAAAGAGCTTATAGCTTCATCGGGAGCGATCAAACCTCTGGTTCGAGCTCTCAAGACAGGAACATCAACCGCTAGAGAGAACGCCGCGTGCGCTCTACTCCGTTTGTCACAAATAGAGGAGACTAAGATCGTAATTGGAAGGTCAGGAGCCATTCCAGCGCTGGTGAATCTTCTAGAGAACGGGGGATTCAGAGGGAAGAAAGACGCATCGACGGCACTATACTCGCTGTGTTCGGTGAAGGAGAACAAGATAAGAGCAGTACAGGCAGGAATTATGAGGGCGCTAGTAGAATTGATGGCCGATTTCGGATCAAACATGGTGGACAAGTCAGCGTACGTGTTGAGCGTGCTGGTATCGGTGCCGGAGGCGAGGACAGCATTAGTGGAAGAAGGAGGGATTCCGGTGCTGGTGGAAATAATAGAGGTGGGTTCACAGAGGCAGAAGGAAATCGCAGTGGTGATACTGTTGCAGATTTGCGAGGACAGCGTGGCTTATCGTACAATGGTTGCTCGCGAAGGAGCCATTCCTCCCTTGGTTGCATTGTCACAGTCCGGTACCAATCGGGCCAAACAGAAGGCGGAGACACTTATTGAGCTACTGCGACAACCAAGATCCGGCAACGTCGCTGCCCGCACCTCGGAAGTAAAAGAAGGCGCCGGAAGGAACGGCAGAGAGAGAGAGAGAGTGATTAGTGGTGTTGTGGGCTTTGGTTTCAAAGAGAACGAGGAGGTGACCGGTGACGTTCAACATTGTCCACATGGATGGAGTGGAAGGGAGGCTGAAGCAGCTAAACCGGGTATTCGCTTGACACGTGTAGTAGATTCCGTTATTGATAAGCAGTTAGTCGTTGGGTCGCATCATGATTATAATCCTTGTCCGCTGCTATGGGTCCCTTGCTTGAAGTCTGGTGGACTCTCTTTTCTATGCTCTCGTAATTGGCACTATTTTACTACTTTGCTTTCTTTATTCATTCCCTTCGATGCCTTTCTTTGTCACTCGGCATTATCAGGCGCCACTTCACTTTCACCAATCAAATCACTTCTTCCCCATTCATCATGCACCTTCAATACCCATCCTCCCACCATTTCTGCTGCCTAA 1506 0.496 MGTDSPANYAYMGRSLSELSINDSSSSAFSDCNSDRSGEFPTASSQSRRLLIACAAENSDDFIRQLVSDLHSTSVDEQKQAALEIRLLAKNKPENRLKIAEAGAINPLISLISSPDLQLQEYGVTAILNLSLCDEKKELIASSGAIKPLVRALKTGTSTARENAACALLRLSQIEETKIVIGRSGAIPALVNLLENGGFRGKKDASTALYSLCSVKENKIRAVQAGIMRALVELMADFGSNMVDKSAYVLSVLVSVPEARTALVEEGGIPVLVEIIEVGSQRQKEIAVVILLQICEDSVAYRTMVAREGAIPPLVALSQSGTNRAKQKAETLIELLRQPRSGNVAARTSEVKEGAGRNGRERERVISGVVGFGFKENEEVTGDVQHCPHGWSGREAEAAKPGIRLTRVVDSVIDKQLVVGSHHDYNPCPLLWVPCLKSGGLSFLCSRNWHYFTTLLSLFIPFDAFLCHSALSGATSLSPIKSLLPHSSCTFNTHPPTISAA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1014 501 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 103 145 IPR000225 GO:0005515
Alju08g1014 501 PANTHER U BOX DOMAIN-CONTAINING 62 337 - -
Alju08g1014 501 Pfam Armadillo/beta-catenin-like repeat 93 131 IPR000225 GO:0005515
Alju08g1014 501 Pfam Armadillo/beta-catenin-like repeat 177 214 IPR000225 GO:0005515
Alju08g1014 501 Pfam Armadillo/beta-catenin-like repeat 134 172 IPR000225 GO:0005515
Alju08g1014 501 SUPERFAMILY ARM repeat 60 336 IPR016024 -
Alju08g1014 501 Gene3D - 205 351 IPR011989 -
Alju08g1014 501 FunFam Arm repeat containing protein homolog-like 255 344 - -
Alju08g1014 501 FunFam ARM repeat superfamily protein 55 200 - -
Alju08g1014 501 Gene3D - 38 199 IPR011989 -
Alju08g1014 501 SMART arm_5 256 296 IPR000225 GO:0005515
Alju08g1014 501 SMART arm_5 174 214 IPR000225 GO:0005515
Alju08g1014 501 SMART arm_5 215 255 IPR000225 GO:0005515
Alju08g1014 501 SMART arm_5 92 132 IPR000225 GO:0005515
Alju08g1014 501 SMART arm_5 133 173 IPR000225 GO:0005515
Alju08g1014 501 SMART arm_5 298 338 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1014 Alju-ChrAlju08 7670537 7672991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1014 63 343 U-box Gene Family AT2G23140 51.957 1.84e-85 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1964 07 45900497 45902191 Alju08g1014 08 7670537 7672991 CCT