Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0998 ATGGTGGCTGAGAAAGCCACGGACATGTCAGACTTTGAGGACGAGGATGACCTCGACGAAGAACCCGGAGAAGTGATCGAATCGGCGCCTCCGCAAAAGGTTGGTGAAGAGAGGGAACTCAACTGCCACCTCAAGAAGAAGCTCCTCAAGCCCGGGCATGGATGGGAAACCCCTGAGTTCAATGACGAAGTAACCGTTCACTATGTGGGGACTTCGCTTGATGGGACAAAGTTCGATTCCACTAGAGATAGGGGTGAACCTGTTACATTTACAGTCGGTCAAGCTCAAGTGGCTGCTGGGTTAGATCGTGGGATTATCACCATGAAAATGGAGGAGGTCGCATTATTCACATTTCCTACTGACTCAGGCGATGAAGTTGTGAATTCCGGAAGTATTCCATCAAACTCAGTCGTCCGGTTTGAGGTTGAACTCATTTCGTGGATCAAAGTGGTGGATGTTTGCAAAGATGGTGGGATTATCAAGAAAATTATGGAGAAGGGAAACAGGAATGAGCGACCCAGCGATCTGGATGAAGTTCTAGTGAAGTACAAGGCGACACTAATTGACGGCACTACTGTTGCAAAGACATCTGAAGAGGGATTTGAGTTCCATGTGAAAGATGGTCATCTATTTCCAGGATTACCAAAAGTAATTATGACCACGGGGAGGGGAGAGCAGGCTAAGTTAATTGTCCAACCTCAGTATGCCTTTGGAGAGAAGGGGGGAGAAACAGAAAGCAGGGTCCATTCAATCCCACCAAATTCAGTATTGCATGTGGATGTTGAATTGGTGTCCTTCAAGCCTGTTATTGATGTCACCGGAGACTTCAAAGTTCTAAAGAAGATACTGAGAGAAGGGGAAGGCTCCCTGACAGCCAATGAGGGTGCGGTTGTGACAATTAGTTATGTAGCTAAGGTAGAACATGGCACAATATTTGAGAAGAAAGGAATTGATGAAACAAAGCCCTTGGAATTCATAACTGATGAAGAACAAGTCATTGCTGGTCTAGATCGAGCAGTGGCTACAATGAAGAAGGGTGAGAAGGCCATTGTAACTATACATCCTGATTATGCATTTGGAAATGTTGAAGCAAGATTTGATTTGGCTAATGTTCCCCCGGGGTCCAATGTAGTCTATGAAGTTGAGATGGTGGACTTTATTAAGGAGAAAGCCCCATGGAAATTAAATAATAGTGAGAAAATTGAGGCAGCTGGGAAGAAGAAAGAAGAAGGAAATCTGTTATTTAAAAATGGCAAGTATCAAAGAGCAGGGAAAAAGTATGACAAGGCTGTTGATTATGTCAGTGAAGATGGATCCTTTGGGGATGATGAGCAAAAGCTAGCTAAGGCACTTAGAGTGTCGTGTTGGTTGAATAGTGCAGCGTGTAGCCTCAAACTTAATAACTTTTCAGAAGCAATCAAGTTATGCTCGCAGGTTCTTGATGTTGAGTTCCACAATGTGAAAGCATTGTACAGACGAGCACAAGCATATATAGAAACTGGGGACTATATTTTGGCAGATGTAGACATAAAGCAAGCTCTTGAGGAAGATCCACAAAACAGGGAAGTGAAGTTGCTTCAGAGGAAATTGAAGCAACTTCATTTTGAGAGTGACAAAAGAGATGCCAAACTCTATGCAAATATGTTTGCACATAAAGAGAAAGACTCGTCGGTAGTAACAAAGAGATTGAAGGTTGAGAAAAGCCAGGATGAAAGGAAAGATGAAGAGGTGGTGATGGAAGAAGTGGACAAAGTTGCGGACAGTGCAGCTCCTCCCGATAGTGATGTAATCAACGATTGA 1800 0.4372 MVAEKATDMSDFEDEDDLDEEPGEVIESAPPQKVGEERELNCHLKKKLLKPGHGWETPEFNDEVTVHYVGTSLDGTKFDSTRDRGEPVTFTVGQAQVAAGLDRGIITMKMEEVALFTFPTDSGDEVVNSGSIPSNSVVRFEVELISWIKVVDVCKDGGIIKKIMEKGNRNERPSDLDEVLVKYKATLIDGTTVAKTSEEGFEFHVKDGHLFPGLPKVIMTTGRGEQAKLIVQPQYAFGEKGGETESRVHSIPPNSVLHVDVELVSFKPVIDVTGDFKVLKKILREGEGSLTANEGAVVTISYVAKVEHGTIFEKKGIDETKPLEFITDEEQVIAGLDRAVATMKKGEKAIVTIHPDYAFGNVEARFDLANVPPGSNVVYEVEMVDFIKEKAPWKLNNSEKIEAAGKKKEEGNLLFKNGKYQRAGKKYDKAVDYVSEDGSFGDDEQKLAKALRVSCWLNSAACSLKLNNFSEAIKLCSQVLDVEFHNVKALYRRAQAYIETGDYILADVDIKQALEEDPQNREVKLLQRKLKQLHFESDKRDAKLYANMFAHKEKDSSVVTKRLKVEKSQDERKDEEVVMEEVDKVADSAAPPDSDVIND 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0998 599 MobiDBLite consensus disorder prediction 561 588 - -
Alju08g0998 599 SUPERFAMILY FKBP-like 152 267 - -
Alju08g0998 599 SMART tpr_5 453 486 IPR019734 GO:0005515
Alju08g0998 599 SMART tpr_5 404 437 IPR019734 GO:0005515
Alju08g0998 599 SMART tpr_5 487 520 IPR019734 GO:0005515
Alju08g0998 599 FunFam Peptidylprolyl isomerase 268 389 - -
Alju08g0998 599 Gene3D - 33 150 IPR046357 GO:0003755
Alju08g0998 599 Gene3D Tetratricopeptide repeat domain 393 547 IPR011990 GO:0005515
Alju08g0998 599 SUPERFAMILY FKBP-like 40 147 - -
Alju08g0998 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 176 267 IPR001179 GO:0003755
Alju08g0998 599 Gene3D - 268 392 IPR046357 GO:0003755
Alju08g0998 599 Pfam Tetratricopeptide repeat 466 530 - -
Alju08g0998 599 FunFam Peptidylprolyl isomerase 392 547 - -
Alju08g0998 599 SUPERFAMILY TPR-like 400 533 IPR011990 GO:0005515
Alju08g0998 599 Gene3D - 151 267 IPR046357 GO:0003755
Alju08g0998 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 295 387 IPR001179 GO:0003755
Alju08g0998 599 MobiDBLite consensus disorder prediction 561 599 - -
Alju08g0998 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 61 148 IPR001179 GO:0003755
Alju08g0998 599 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Alju08g0998 599 MobiDBLite consensus disorder prediction 1 38 - -
Alju08g0998 599 MobiDBLite consensus disorder prediction 9 24 - -
Alju08g0998 599 PANTHER PEPTIDYLPROLYL ISOMERASE 149 268 - -
Alju08g0998 599 SUPERFAMILY FKBP-like 275 404 - -
Alju08g0998 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 291 383 IPR001179 GO:0003755
Alju08g0998 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 56 145 IPR001179 GO:0003755
Alju08g0998 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 172 264 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0998 Alju-ChrAlju08 7557166 7562107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0998 33 550 Calmodulin-binding Proteins AT3G25230 55.577 0.0 560