LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju08g0993	ATGTTTTTCCACGAAGAAGAAGAAGCGGTCCAGTTGCCATGTCCGGTTCGGGAAACGGCGGTTCTTACGGCTGGGGATATAGAGGAGCTGTTGTCCCTCATCCAATCAGGAGATGAAGAAGACCATAACAACACGACGAGCCCAAGCTCCGGTTCGCAAGGGTCGAGCCGGGAGGTTTACTCCAACGACGAGAGAAAGCGCAGGAGGATGCAGTCGAATCGGGAGTCAGCCCGACGGTCCCGCTGGAGAAAGAAGAGACATTTAGAGGACCTGAACAACCAAGTGAACCGCTTCTCCATTGAAAACCAACAGCTCAAAAACCGGCTTGGCCTCGCCGTGCATCAAATCCGTCTAGCATGCTCAGAGAACGAACGCCTGAGAACCGAATCGGTGGCCCTCACGGCCAGACTTTCTGATCTATATTTGATTTTAGGCTCCATGCATTAA	447	0.5257	MFFHEEEEAVQLPCPVRETAVLTAGDIEELLSLIQSGDEEDHNNTTSPSSGSQGSSREVYSNDERKRRRMQSNRESARRSRWRKKRHLEDLNNQVNRFSIENQQLKNRLGLAVHQIRLACSENERLRTESVALTARLSDLYLILGSMH	148

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju08g0993	148	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	68	83	IPR004827	GO:0003700\|GO:0006355
	Alju08g0993	148	Gene3D	-	63	117	-	-
	Alju08g0993	148	MobiDBLite	consensus disorder prediction	37	58	-	-
	Alju08g0993	148	CDD	bZIP_plant_GBF1	66	115	IPR045314	GO:0003700\|GO:0006355
	Alju08g0993	148	PANTHER	BZIP TRANSCRIPTION FACTOR 44	44	146	-	-
	Alju08g0993	148	Coils	Coil	88	108	-	-
	Alju08g0993	148	SMART	brlzneu	61	125	IPR004827	GO:0003700\|GO:0006355
	Alju08g0993	148	Pfam	bZIP transcription factor	65	110	IPR004827	GO:0003700\|GO:0006355
	Alju08g0993	148	FunFam	BZIP transcription factor	63	114	-	-
	Alju08g0993	148	MobiDBLite	consensus disorder prediction	36	85	-	-
	Alju08g0993	148	MobiDBLite	consensus disorder prediction	59	77	-	-
	Alju08g0993	148	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	63	109	IPR004827	GO:0003700\|GO:0006355
	Alju08g0993	148	SUPERFAMILY	Leucine zipper domain	65	115	IPR046347	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju08g0993	Alju-ChrAlju08	7521416	7521862	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju08g0993	63	140	bZIP Transcription Factor Family	AT4G37730	55.128	2.65e-20	82.8

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Alju08g0993		bZIP_1	4.2e-10	CL0018