Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0975 ATGATCCGAGAACCAACCCCGTTCGTCCTCCCTAATCTTCATATTCCTCCTTGGCTCTCTGATAATTCCCTGGGAGCCGCCCCACCTTCCCCTTCTTCATTCCCTGTCCCAATCAACACCGACGTCGACTCCTCCGTCCTCCTCCTCCACCACCCGCTTCTTTCCAATGACTGTACCCTCCCGGAACTGCACTCTCTCGCTCAAGACTTCGACATGCCCGTCGATGCTTTCTCCTCCGATCAGTTCCGCATGTTCGAGTTCAAGATCCGCAAGTGTCCACGTGGCGGCAGGACACATGACTGGACCCGCTGTCCCTTTGCCCATCCCGGCGAGAAGGTTCGCCGCAGAGACCCCCGCAAATTCTCCTACTCCGCCACTCCTTGCCCTGACTTCCGCCATGCAAACTGCAAGAAAGGTGACTCCTGCGATTTTGCTCACGGAGTCTTCGAATGCTGGCTTCATCCTTCTCGCTATAGAACTCAACTCTGCAAATATGCTACCAAATGTCACCATCGAGTCTGTTTCTTTGCCCACACTCTCGATCAGTTGCGTGTCCTCACTCGCGCCTCCGTCGAATCATCGGTCGGGTCGCCGATTCGTCGCTCTCTGGATTCATCTAGGAGCGGCTCTTCGTTTATCTCGTCACGAACTTCAGTCTTTACATCATCACTACCTGAGAGCTCACCCTTGTCGCCGGGAAATTCCCAGTTTGGCGGTGACACATACAATGCGATGAGTGAAATAGTAACCTCAATGCGTAATGTTCAGCTTGATTCGAACCGGATGGTTTCTGGTTTTGGTTCTCCCCGTGGTTCGATTCTCCGACCCGGGTTTTCCAGCCTTAAGTTGACCCCGACGTGGGCAGGAACCGATAAATCTGGACCCGGTTCAACGGATCTCTGGGATAGTAGCCACGAAGAAGAGGTACCCATGGAAAGAGTGGAATCAGGAAGAGACCTTAGAGCCAAAATCTATGCCAAACTCAGCAATGAAACCTCGTACGGGCGAAGCAACACGCCTCTATCGCCTCCAGACTTTGGATGGGTGTCCGAACTGGTGAAGTGA 1065 0.5343 MIREPTPFVLPNLHIPPWLSDNSLGAAPPSPSSFPVPINTDVDSSVLLLHHPLLSNDCTLPELHSLAQDFDMPVDAFSSDQFRMFEFKIRKCPRGGRTHDWTRCPFAHPGEKVRRRDPRKFSYSATPCPDFRHANCKKGDSCDFAHGVFECWLHPSRYRTQLCKYATKCHHRVCFFAHTLDQLRVLTRASVESSVGSPIRRSLDSSRSGSSFISSRTSVFTSSLPESSPLSPGNSQFGGDTYNAMSEIVTSMRNVQLDSNRMVSGFGSPRGSILRPGFSSLKLTPTWAGTDKSGPGSTDLWDSSHEEEVPMERVESGRDLRAKIYAKLSNETSYGRSNTPLSPPDFGWVSELVK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0975 354 MobiDBLite consensus disorder prediction 332 354 - -
Alju08g0975 354 MobiDBLite consensus disorder prediction 285 309 - -
Alju08g0975 354 PANTHER UNKEMPT FAMILY MEMBER 69 354 IPR045234 -
Alju08g0975 354 SMART c3hfinal6 157 180 IPR000571 GO:0046872
Alju08g0975 354 SMART c3hfinal6 122 148 IPR000571 GO:0046872
Alju08g0975 354 Gene3D - 85 147 - -
Alju08g0975 354 ProSiteProfiles Zinc finger C3H1-type profile. 122 149 IPR000571 GO:0046872
Alju08g0975 354 MobiDBLite consensus disorder prediction 285 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0975 Alju-ChrAlju08 7383280 7384344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0975 71 186 C2H2 Transcription Factor Family AT5G12850 62.069 5.88e-50 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju08g0975 None None None