Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0959 ATGAACAGAGGCTCGAACAGGGAGAGAATCCCATATATTTTTGATTGTGATGTGCAAACTGAAACTGTTGAGAGAAGAAGACAAGATAGGGGACATGAGCAATACAAATGTAGGACTCTGTTTTTCGGTTTCTGGTTTGGTTTAAACTTTGAGCAAGCTTGGGTGCGGCTTATTTTAATTGATATGTTGTGCGCTCCAGAGGAGATGGCTGGCCAAAATTCAAGTGTATTTTATGAAACTCCACAAAATCCAGCGCCCAACTCACTCATCCAGTGCTATTCATTGAACCTCAATGACCAAACTCGTATCATGGATGGAATATCTATGCTTTCTGGTTCTCAAGTGCATGGCGCATCTGGAAGCAATGTGAATGTCCACCTGATAAATCCTGGAACTATTGATTCTAATGCATTTTTTTCATCCAAAGGAAAGAACATTATTGGATATGCCTCACAGGGAACTTCTTCATGTACCATAAATAACAGCGGGTTTCAAGAGCAAACAGCTTCCCCTGCTTCACTTTCTGGCATTCTTGCTGCTAGAATTGGTCATCAAGAAAATTTAGAGAAATCACAAGTTTTATCTCCTTCATTCGGTTCACTGGACTCATTGGGACCTTATATGTTAGAAAATTGGTCATATGCTCCAAGCCATTTGCCTTTAACTCATGGCTACAACAATAATATGCCTAATGGAAACTTGGATTCAAATGGATGGGCTTCATCATCAAATGTTACAATCTTGAGCAGCCTTGCTTATGGTTCATCTAATTTCTGTAATGAACCTGTATTAAGCCTTGCAACATCTCCAACAACAGTCCAGTTCTCTGAAGTGAGTTGTTCTGATCAAGTTACCCGTTGCTTCAGTAAAACAAGGTCAGGCTTGGAACTTGCCTCTTGCAGCAACAGGGAGCCTGCCACGAGTTTGAACAACTCTGCTGGTAGACACTTCCATTCTAGTCAAGCAATGTTAGGATCAAGATATCTTACTGGAATTCAAGAAATACTCGCTCAACTTGCAAGATTCTCACTTGAGAATCTTAAACAGGTAAGATATTCACAAGCAAGTTCTATGTTCAATCTCAACATGGAAGCTCCTTTGCCAATACATGCAGCTGAATCAAACAAGTCCCAGCTGCTGACACTCTTAGAACTGGTGGACAGCCGGTATAATCAGTGTCTGGATGAGATCCATACTGTTGTTTCCGCATTCCATGCTGCTACAGAGTTGGACCCACGAGTTCATGTTCATTTTGCTCTCCAAACAATCTTTCTCTTATACAAGAACTTGCGAAACAGGATTAGCAATTACATTCTTGCCATGGGGCCACCGGATTTGGACAGTTTATGCGCAGTGGACAAGGAAGGATCTATTGATCCTTCACTCATTCATAAGCAATTGTCTCTCCAAACGCTGAAACGAAAAGATCATCAATTATGGAGGCCCCCAAGGGGTTTGCCAGAAAACTCTGTCTCAATCTTGCGTGCCTGGATGTTTCAGAACTTTCTCCATCCGTATCCTAAAGATTCGGAGAAGCATTTACTTGCATTAAAAGCAGGGTTGACCAGAAACCAGGTATCTAACTGGTTTATAAATGCTCGTGTTCGGCTATGGAAACCCATGATTGAGGAAATGTACGCTGAACTGAATCGTAAAAGAAAGGCTAGTCGAAATGAAGGAGAAGCCGAGAGCAGCAGTCATGGAAGGCTTGGGCGATAA 1719 0.4183 MNRGSNRERIPYIFDCDVQTETVERRRQDRGHEQYKCRTLFFGFWFGLNFEQAWVRLILIDMLCAPEEMAGQNSSVFYETPQNPAPNSLIQCYSLNLNDQTRIMDGISMLSGSQVHGASGSNVNVHLINPGTIDSNAFFSSKGKNIIGYASQGTSSCTINNSGFQEQTASPASLSGILAARIGHQENLEKSQVLSPSFGSLDSLGPYMLENWSYAPSHLPLTHGYNNNMPNGNLDSNGWASSSNVTILSSLAYGSSNFCNEPVLSLATSPTTVQFSEVSCSDQVTRCFSKTRSGLELASCSNREPATSLNNSAGRHFHSSQAMLGSRYLTGIQEILAQLARFSLENLKQVRYSQASSMFNLNMEAPLPIHAAESNKSQLLTLLELVDSRYNQCLDEIHTVVSAFHAATELDPRVHVHFALQTIFLLYKNLRNRISNYILAMGPPDLDSLCAVDKEGSIDPSLIHKQLSLQTLKRKDHQLWRPPRGLPENSVSILRAWMFQNFLHPYPKDSEKHLLALKAGLTRNQVSNWFINARVRLWKPMIEEMYAELNRKRKASRNEGEAESSSHGRLGR 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0959 572 Pfam Homeobox KN domain 497 536 IPR008422 GO:0003677|GO:0006355
Alju08g0959 572 Gene3D - 484 561 - -
Alju08g0959 572 ProSiteProfiles 'Homeobox' domain profile. 499 540 IPR001356 GO:0003677
Alju08g0959 572 SUPERFAMILY Homeodomain-like 483 548 IPR009057 -
Alju08g0959 572 SMART prehox3 317 436 IPR006563 -
Alju08g0959 572 SMART HOX_1 480 544 IPR001356 GO:0003677
Alju08g0959 572 CDD homeodomain 480 541 IPR001356 GO:0003677
Alju08g0959 572 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 236 562 - -
Alju08g0959 572 Pfam Associated with HOX 324 435 IPR006563 -
Alju08g0959 572 MobiDBLite consensus disorder prediction 551 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0959 Alju-ChrAlju08 7285722 7288885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0959 260 553 Homeobox Transcription Factor Family AT4G32980 50.160 1.23e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Alju08g0959 POX 1.2e-19 No_clan