Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0935 ATGTCGACGGTATACGTGTTAGAACCACCGACGAAAGGGAAGGTGGTGTTGAACACAACCCATGGTCCGCTCGACATTGAGCTATGGCCTAAGGAAGCCCCCAAAGCTGTCAGGAACTTCGTGCAGCTCTGCCTTGAATGTTACTACGTTAACACCATCTTCCATCGTATCATCAAGGACTTTCTTATCCAGGGTGGCGATCCCACTGGCAGCGGCACAGGGGGTGAAAGTATTTATGGGGGTGTCTTCTCTGATGAATTTCATTCACGTTTAAGATTTAAACATAGAGGATTAGTTGCAATGGCAAATACTGGGTCACCAAACTCCAATGGGAGTCAGTTTTTCATAACTCTGGATCGTTGCGACTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACGGGAGATACAGTGTACAACCTTTTGAGATTGGGTGAACTTGAAACTGATAAGAATGATCGCCCTCTAGATCCCCCGAAAATATTATCAATTGAGGTGTTATGGAACCCATTTGATGATATTGTTCCAAGAACAAATCAACCTCAGATCCAAACTAGTGCCCATACAGACAGTAAAGATTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTGCTTTCATTTGGAGAAGAAGCTGAAGAAGAGGAAAAGGAGCTGGCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAAGGAAGCAATTCCTGATAATGAACTGGGCTCATCTGGTGGTAAGTCGACAAGAGATGTGCAGTTATCTGTGAGGGATGCATTGAGCTCAAAGAAAGAAGAGTCTCAGAAAAAATCAGAAGATAATGACGCCAACCTTGATGACAGTGATGATGATGATGAGGCAGACTTTGATGCCAGAATGCGCAGTCAAATACTTAAAAAACGCCAAGAGTTAGGGGATTTACCACCGAAGCCAAAGTTGCAAAATGGAAGCTCAAGTCCAAAGAACCACAATTCATCAGCAATCAGGTCCAATGCTGTAAGTGTTGATGATGATCAACCTAGGGTGGAAAAATTGTCCATGAAGAAAAAGGGAATAGGATCTGAAGCAAGAGCTGAACGAATGGCAAATGCAGATGCAGATTTACAGTTGTTCAATGAATCTGAGAAAAATAGACTGTTGCGGAAGCAGAAGAAACGCAGAGTTCAAGGACGTGAAGATGAGGTTCTAGCAAAACTAGAGAAATTTAAGGTGGCTCGATCGGAAAAGAACACGCCCTCAACTGATGGATCTGGAGATGTAAACGAAGAGGCCGTGTCAGATTGGAGAGGAGCTGGCTTAAAATTTCCTCCTGAGTCTGGGAAGGATCGGATGACACGCAGCGATGACCCAAATGACTATGTTGTGGTTGACCCACTTTTGGAGAAGGGTAAAGAGAAGTTCAATAGGATGCAAGCCAAACAAAAGAGACGAGAGCGAGAGTGGGCTGGGAAATCCCTTACTTGA 1485 0.4343 MSTVYVLEPPTKGKVVLNTTHGPLDIELWPKEAPKAVRNFVQLCLECYYVNTIFHRIIKDFLIQGGDPTGSGTGGESIYGGVFSDEFHSRLRFKHRGLVAMANTGSPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTVYNLLRLGELETDKNDRPLDPPKILSIEVLWNPFDDIVPRTNQPQIQTSAHTDSKDSKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLNDPRLLKEAIPDNELGSSGGKSTRDVQLSVRDALSSKKEESQKKSEDNDANLDDSDDDDEADFDARMRSQILKKRQELGDLPPKPKLQNGSSSPKNHNSSAIRSNAVSVDDDQPRVEKLSMKKKGIGSEARAERMANADADLQLFNESEKNRLLRKQKKRRVQGREDEVLAKLEKFKVARSEKNTPSTDGSGDVNEEAVSDWRGAGLKFPPESGKDRMTRSDDPNDYVVVDPLLEKGKEKFNRMQAKQKRREREWAGKSLT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0935 494 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Alju08g0935 494 Coils Coil 205 232 - -
Alju08g0935 494 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Alju08g0935 494 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Alju08g0935 494 MobiDBLite consensus disorder prediction 319 340 - -
Alju08g0935 494 MobiDBLite consensus disorder prediction 465 494 - -
Alju08g0935 494 CDD cyclophilin_CeCYP16-like 8 179 - -
Alju08g0935 494 MobiDBLite consensus disorder prediction 249 263 - -
Alju08g0935 494 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Alju08g0935 494 MobiDBLite consensus disorder prediction 413 494 - -
Alju08g0935 494 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
Alju08g0935 494 Gene3D - 2 182 IPR029000 -
Alju08g0935 494 MobiDBLite consensus disorder prediction 243 367 - -
Alju08g0935 494 MobiDBLite consensus disorder prediction 264 283 - -
Alju08g0935 494 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Alju08g0935 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Alju08g0935 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Alju08g0935 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Alju08g0935 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Alju08g0935 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Alju08g0935 494 MobiDBLite consensus disorder prediction 343 367 - -
Alju08g0935 494 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0935 Alju-ChrAlju08 7094850 7099313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0935 9 172 U-box Gene Family AT5G67530 48.171 6.10e-43 159