LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju08g0928	ATGGTCCCAAACATGAGTGATGATATTTCATCTGAAGGTGACTTCACTAGCCACCACCAGTGGCCTTTGGAGCTCTCTGATTACTTGAAATTTGATGGTGGTGATCATTGGCCAGACGATGATCCAGATCAGTGTTTTGTTTCTGGTGGTGGGCATGTTCCTAACCAATTGATCTATCAAAACTCCATTGAAGTAGGTGACTTGGGAGGAAGTGGCAGTCACTTTGAAGGGTCTTCTAGTAGTGGTGGCACCAACATGATAAATAATGGAAGCCAGAAGAAGGAAGTCAAAGAGAGATTTGCATTCAGAACAAGGTCAGAGGTTGAAATACTGGATGACGGCTACAAGTGGAGAAAGTATGGGAAGAAGATGGTGAAGAACAGCCCCAATCCAAGGAATTACTACAGGTGTTCAGAGGAAGGATGCCCAGTGAAGAAGAGGGTGGAGAGAGATGGAAATGATCCCAAGTATGTAATAACTACGTATGAAGGCGTCCACAATCACAGCAGTTTTTACTAG	519	0.4412	MVPNMSDDISSEGDFTSHHQWPLELSDYLKFDGGDHWPDDDPDQCFVSGGGHVPNQLIYQNSIEVGDLGGSGSHFEGSSSSGGTNMINNGSQKKEVKERFAFRTRSEVEILDDGYKWRKYGKKMVKNSPNPRNYYRCSEEGCPVKKRVERDGNDPKYVITTYEGVHNHSSFY	172

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju08g0928	172	MobiDBLite	consensus disorder prediction	69	95	-	-
	Alju08g0928	172	SMART	WRKY_cls	111	170	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Alju08g0928	172	SUPERFAMILY	WRKY DNA-binding domain	103	169	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Alju08g0928	172	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	83	169	IPR044810	GO:0003700
	Alju08g0928	172	ProSiteProfiles	WRKY domain profile.	106	171	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Alju08g0928	172	Pfam	WRKY DNA -binding domain	112	168	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Alju08g0928	172	MobiDBLite	consensus disorder prediction	73	91	-	-
	Alju08g0928	172	FunFam	WRKY transcription factor 57	97	171	-	-
	Alju08g0928	172	Gene3D	WRKY domain	98	164	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju08g0928	Alju-ChrAlju08	7056498	7057719	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju08g0928	27	171	WRKY Transcription Factor Family	AT5G26170	51.923	2.22e-43	140

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Alju08g0928		WRKY	4.4e-25	CL0274