Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0914 ATGGCAGATCCCAACCCCATAAACATTGTTCCCTATGTCGACGCTCTCGATGAAGATGCCAACTTGATCCTTAATTTCAACGAAAACCCTAAACCCACGCTCCTAAACTCATCCAATAACCACCATGTACAAAACTTCCCCCCCGACTCTTCCTCGGCGGTGCCGGAAATGTATGATGATGCAGCTGTGCAAGCCTTACTCGCCGACATTAGCCCATATTTAGATCCTATGACTCCTTCCGACAACGTTAACCAAACCGGCCCTTCTCATCAATTCCCACAGCAAAATATTCCAGTAGCCCCTCGACAGATTAATAATCAGAGTGCAACAACATTGTGGCCTGACTCACCAATCCCATTGTCTTGCACTTTCTGTCAAGTTCTTCGTGACATAGTTTATACTGATGGTGTTCTTTTAGTCTCCAGACTTCAAATTCATGGCAAACCTGGAATCATCTCACATGCACTTCTTTATCAGAAAACCGATGCGGGTTCTTCTTCGGCCCAACAACAACAACAACAACAACAACCACCTTTTCAAATAATCGATTTTACGGATAAGAACATGTACCAAATCAAGGCTTTCTTAGCCCGACACTGTTTGAACCATAATTCAATGGGCTACTTTATGTTGCAAGATTCACTTTCTCTCTATTATGAAACCCTGTGCTGCGGATTGGATTGGGCTGAAGACTTCAAAGATGACCCCACTGACCAAAAACCTGATGATGACAATTCAGGAGGAATAACTGGTATGGAACAGGAGGTGAAGGCCGGGGATGAGATGAAAGCAGGGACTTCAGACACTTGCCTTGGGGAACAGAGGGAGAGGGTGGAGAAGATGAAACTAAGCGATATGAGAGATATGTTTGGCCTGCCTATTCAAAAAGCAGCCAAGAGGTTGAAGTTATGTCCCACACAAATGAAGAAGATATGTCGGAAACAAGGATTAGAACGATGGCCTCGCAGAAAGGTGAAATGCATAGAGAGGCAAATATCGATATTGAAAAGGGCTTTAGAATCAGAACAAGGTGCAGCAACAAGGGCACAAACTGAAGCAGAAATCGAGAGACTTGAACAGGACCTGGTTCGGTACTGTGGTGGATTCCCTCCAACTTCATTGAATATCGAATCAAAGTAG 1140 0.443 MADPNPINIVPYVDALDEDANLILNFNENPKPTLLNSSNNHHVQNFPPDSSSAVPEMYDDAAVQALLADISPYLDPMTPSDNVNQTGPSHQFPQQNIPVAPRQINNQSATTLWPDSPIPLSCTFCQVLRDIVYTDGVLLVSRLQIHGKPGIISHALLYQKTDAGSSSAQQQQQQQQPPFQIIDFTDKNMYQIKAFLARHCLNHNSMGYFMLQDSLSLYYETLCCGLDWAEDFKDDPTDQKPDDDNSGGITGMEQEVKAGDEMKAGTSDTCLGEQRERVEKMKLSDMRDMFGLPIQKAAKRLKLCPTQMKKICRKQGLERWPRRKVKCIERQISILKRALESEQGAATRAQTEAEIERLEQDLVRYCGGFPPTSLNIESK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0914 379 MobiDBLite consensus disorder prediction 234 268 - -
Alju08g0914 379 ProSiteProfiles RWP-RK domain profile. 268 348 IPR003035 -
Alju08g0914 379 PANTHER PROTEIN RKD4 105 360 IPR044607 GO:0003700
Alju08g0914 379 Coils Coil 341 361 - -
Alju08g0914 379 Pfam RWP-RK domain 281 326 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0914 Alju-ChrAlju08 6957517 6959084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0914 279 345 NLP Transcription Factor Family AT4G24020 44.776 9.53e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Alju08g0914 RWP-RK 8.7e-18 No_clan