Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0912 ATGGATGGCGATAATAGGAATCAAGTTCCAAAACCAGCAGAAGCAAGCATGACGGAGAAGGAAGCAGCTAATGCAGGCGAAGTGGTGGTGGCGATCTCTGTGCAAGACTCCAAAATGGCTGAATGCAATGACGTCATCAATAATGTGTATGCTGCACCGAAGTCTCCGCTTTTAAACGTTGCTTCCCCTGAAATACGTTTCAGTCCCAGCCCAAGGAAGCCACCCAAGCACCCTCTCGGCAACGAAAACCCAGTTCAAAGAAAGTCGCTGATGAGGTCAGTGTATTCCAAACCCAAATCAAGATTTGGTGAACAATCTTATTCTGTTGATGCCACATTGTTTGAGGGTAACAATGATTCCACATTGCAAGAGCAAATGGCTGTTAATTCACCATATAGAAACTCCTTCAATAAGGGTTCGCCAAATAACAAATCTAGGATTGTTAATAGAACAGCGTCCATAACTTCTTCCATCACTCCCAAGACACCATTCATGGCATCTCCAGGGCCTGCCGGAGAGAATGAGGATGAAATCTTGTATAGGAGAGTTGAAATGAGTAAAGGGAGGCGCAAGACTGTAACCACTAAGGTTTTGATCGAGTGGGTTGTATTTATATGCATTATGGGGTGCCTAGTGGCTAGCCTGACTGTTAATAAACTGAAGAACACTATCATTTGGGGCTTGGAGTTTTGGAGATGGTGTGTGCTTGTGTTGGTGATCTTTTGTGGCATGTTAGTCACAAACTGGATAATGCACATAATTGTGTTCTTGATTGAACTGAACTTTTTGCTTAGGAAAAAAGTGCTATATTTTGTTCATGGACTGAAGAAGAGTGTTCAGGTCTTCATTTGGCTGGGTTTGATTCTTCTCACTTGGGTTCTGTTAATCAATCAAAGGGCCCAGCAATCTGAACTCACCACAAAAATTTTGAATGGGGTAACACAGACTCTTATTTCTCTTCTCATTGGAGTGTTCTTGTGGTTCCTTAAGACATTGTCTCTGAAGATATTAGCATCAAAATTCCATGTCAGATCCTTCTTTGATAGAATTCAAGAATCAATCTTTCATCAGTATGTTCTGCAGACGCTGTCAGGGCCTCCACTTATAGAGGAGGCAGAGAAGATAGGGAGATCACCTAGTATTGGTCAATTTAGTTTTAGGAGTACAAAAGGTAAAGGAGGCGTAAAGAAAGAGGTCATTGATGTGGCAAAGCTTCACAAGATGAAACAGGAAAAGGTTTCAGCTGGGACCATGAAGATCTTGGTTGATGCTGTGACAAATTCAAGGTTGTCCACTATCTCTAGTGCACTAGATGAAACTTTTGAACAAACTGATAAAGAGATTAGCAATGAGATGGAAGCAACTGCCGCTGCCTATAACATTTTCAGAAATGTTGCAACCCCTGGTTCCTTGTACATTGATGAGGATGACCTTCGGAGGTTTATGATTAAGGAAGAAGTGAATCTGGTTTTTCCCTTGTTTGATGGAGCGGAAACTGGACGAATTGACAGAAAGGCCTTAACAAGCTGGGTGTTGAAGGTTTATCAGGAGCGCAAAGCATTGGCACATGCCTTGGGTGACACCAAAACAGCAGTGAAACAGCTAAGCAACCTTGTGACAGGGATTCTGGTGGTTGTGACCATAATAGTGTGGCTTCTCCTGATGGAGATTGCCACTACTAAATTACTTTTGTTCTTCTCATCACAGCTAGTACTAGTTACTTTCATGTTTGGAAACACATGCAAGAACATATTTGAAGCTATCATCTTTGTGTTTGTGATGCATCCCTTTGATGTCGGTGATCGATGTGTTGTTGATGGTGTTCAGCTACTGGTTGAAGAAATGAATATATTGACCACAGTCTTCCTGAAGCTTAATAATGAAAAGGTGTATTATCCAAACTCAATTCTAGCGACTAAACCCATAAGCAATTATTACAGAAGTCCAGATATGGGAGACACTGTTGAGTTCTGTGTTGACTTCATGACACCATTGGAGAAACTTGGGGCTCTGAAAGAAAAAGTAAAGAGGTACTTGGAGAGAAATCCACAACATTGGCATCCTAATCACAATGTTGTGCTAAAGGAGATTGAAAATGTGAACAAGTTAAAGATGGCTCTGTATGTAACCCACGCAATGAACTTTCAAGAGTGGGCAGCGAAGAACACGCGAAGAAGTGAATTGGTGACGGAGATAAAGAAAATATTTGAAGAGCTGAATATTAGATACAATCTTCTTCCCCAAGCGGTTCATCTCAGCAATACTGGATCTGATACAACTCTACTCACGAGATGA 2295 0.4153 MDGDNRNQVPKPAEASMTEKEAANAGEVVVAISVQDSKMAECNDVINNVYAAPKSPLLNVASPEIRFSPSPRKPPKHPLGNENPVQRKSLMRSVYSKPKSRFGEQSYSVDATLFEGNNDSTLQEQMAVNSPYRNSFNKGSPNNKSRIVNRTASITSSITPKTPFMASPGPAGENEDEILYRRVEMSKGRRKTVTTKVLIEWVVFICIMGCLVASLTVNKLKNTIIWGLEFWRWCVLVLVIFCGMLVTNWIMHIIVFLIELNFLLRKKVLYFVHGLKKSVQVFIWLGLILLTWVLLINQRAQQSELTTKILNGVTQTLISLLIGVFLWFLKTLSLKILASKFHVRSFFDRIQESIFHQYVLQTLSGPPLIEEAEKIGRSPSIGQFSFRSTKGKGGVKKEVIDVAKLHKMKQEKVSAGTMKILVDAVTNSRLSTISSALDETFEQTDKEISNEMEATAAAYNIFRNVATPGSLYIDEDDLRRFMIKEEVNLVFPLFDGAETGRIDRKALTSWVLKVYQERKALAHALGDTKTAVKQLSNLVTGILVVVTIIVWLLLMEIATTKLLLFFSSQLVLVTFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLNNEKVYYPNSILATKPISNYYRSPDMGDTVEFCVDFMTPLEKLGALKEKVKRYLERNPQHWHPNHNVVLKEIENVNKLKMALYVTHAMNFQEWAAKNTRRSELVTEIKKIFEELNIRYNLLPQAVHLSNTGSDTTLLTR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0912 764 FunFam Predicted mechanosensitive ion channel 596 645 - -
Alju08g0912 764 PIRSF Memb_At2g17000 6 762 IPR016688 -
Alju08g0912 764 Pfam Mechanosensitive ion channel 538 742 IPR006685 GO:0016020|GO:0055085
Alju08g0912 764 MobiDBLite consensus disorder prediction 1 25 - -
Alju08g0912 764 Gene3D - 596 645 IPR023408 -
Alju08g0912 764 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 10 755 IPR016688 -
Alju08g0912 764 MobiDBLite consensus disorder prediction 64 84 - -
Alju08g0912 764 SUPERFAMILY Sm-like ribonucleoproteins 586 645 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0912 Alju-ChrAlju08 6940645 6943353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0912 17 753 Mechanosensitive Ion Channel Family AT5G12080 58.069 0.0 857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0912 08 6940645 6943353 Alju08g0912 08 6940645 6943353 ECH