Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0909 ATGCAGATCAAACCAGTACGTTCTGAGCTGCACAATAAGAAGAAAAGCACGTCAATGGATCGGCATAGAAGTCAGGGACGGAAGAAGGAACCTTGCAGAGGAGCCTGGACACCTGAGGAAGACAAGAAATTGGTTCAAGTCATTGAGTTACATGGCCCGAAGAGGTGGAAGTTTTTATCAGCCAAAGCAGGTCTAAATCGATGTGGCAAGAGTTGCAGACTAAGATGGTTAAATTACCTTAGACCCAACATTAAGAGAGGCAATATATCAGACCAAGAAGAGGACTTAATACTCAGGCTCCACAAACTCCTAGGCAACAGGTGGTCTTTGATAGCTGGAAGACTCCAAGGTCGTACTGATAATGAGATTAAGAATTACTGGAACTCTCATTTGAGCAAGAAAATAAGTTTGGATTTGCAGATCCTTGAACTCCATCATCAACTTTCGTAG 450 0.4289 MQIKPVRSELHNKKKSTSMDRHRSQGRKKEPCRGAWTPEEDKKLVQVIELHGPKRWKFLSAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLQGRTDNEIKNYWNSHLSKKISLDLQILELHHQLS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0909 149 Gene3D - 32 85 - -
Alju08g0909 149 CDD SANT 35 80 IPR001005 -
Alju08g0909 149 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 80 IPR017930 -
Alju08g0909 149 Gene3D - 88 147 - -
Alju08g0909 149 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Alju08g0909 149 FunFam MYB-related transcription factor 32 85 - -
Alju08g0909 149 SUPERFAMILY Homeodomain-like 33 127 IPR009057 -
Alju08g0909 149 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 19 136 - -
Alju08g0909 149 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
Alju08g0909 149 SMART sant 32 82 IPR001005 -
Alju08g0909 149 SMART sant 85 133 IPR001005 -
Alju08g0909 149 Pfam Myb-like DNA-binding domain 33 80 IPR001005 -
Alju08g0909 149 Pfam Myb-like DNA-binding domain 86 131 IPR001005 -
Alju08g0909 149 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Alju08g0909 149 MobiDBLite consensus disorder prediction 1 35 - -
Alju08g0909 149 CDD SANT 90 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0909 Alju-ChrAlju08 6931935 6932587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0909 21 137 MYB Transcription Factor Family AT5G40330 62.393 3.06e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju08g0909 Myb_DNA-binding 4.8e-18 CL0123