Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0900 ATGATTCATAAGAAGATTACATGGAGATCTATCATCTTAATGTTCAGTTGTTACAAGACTAAATGCCCATTGAAGGAATCCAAGAAGAAGATCTCAAAGCAAGGTTCTTTTCAGAGATTAAGCCTCTCTGATATCAGCATTTCTAGCTCTGGTCAGGCCATTGATGATCTTTCCATTTCCCTTGTTGGCCAAAAGCTTTATCCATTTACCCTTGAAGAGCTAAGAGAAGCAACAAATAATTTCTCTTGGAGTGATATGATAGGTGAAGGTGGGTTTGGACCTGTGTACAAGGGATTTGTTGATGACAAGATTAAACCTGGTTTGAAAGCTCAATCTGTGGCTGTGAAAAGACTAAACTTGGATGGTATGCAAGGTCATAGGGAATGGCTGGCAGAGATAATCTTCCTAGGACAGCTAAAACATCCAAATCTTGTTAACTTGCTTGGGTACTGTTATGAGGAGGAACACAGGCTTTTAGTGTATGAATACATCCCAAGAGGAAGCTTGGAGTGCCAACTTTTCAGAAGATACACTGCAGCCTTGCCATGGTCAACCAGGATAAAAATTGCATTGGGAGCAGCTAAGGGCCTAGCCTTCCTTCATGAAGCAGACAAACCTGTAATATATAGAGATTTCAAAACTTCAAATATCTTATTAGACTCGGACTATATAGCTAAATTGTCAGACTTTGGATTTGCAAAAGATGGACCTGAAGGAGAAGACACACATGTAACAACAAGAATAATAGGAACACAGGGCTATGCAGCACCAGAGTACATAATGACAGGTCACCTAACAACGAAGAGCGATGTGTATAGCTATGGAGTGGTGCTATTACAACTGATAACAGGAAGAAGGATAATCGACAAGAACAGGCCAAGTAGAGAGCAGAGCCTAGTGGAATGGGCAAGGCCTTTATTGAGAGACCAGAGAAAGCTTCATCAGTTCGTAGACCCTAGACTTGAAGGACGATTTCCTATCAGAGGTGCTCATAAAGTTGCTGCCTTGGCTTACAAGTGCTTGAGCCACCACCCACAGCCTAGGCCCACTATGAGTGATGTGATCAACATTTTGGAGCCACTTCAGCACTTTGATGATGCATTCATTGAACCCTTTGTGTATGTGGCCATCAATCAAGATGGCAGAATCAACTGA 1155 0.4182 MIHKKITWRSIILMFSCYKTKCPLKESKKKISKQGSFQRLSLSDISISSSGQAIDDLSISLVGQKLYPFTLEELREATNNFSWSDMIGEGGFGPVYKGFVDDKIKPGLKAQSVAVKRLNLDGMQGHREWLAEIIFLGQLKHPNLVNLLGYCYEEEHRLLVYEYIPRGSLECQLFRRYTAALPWSTRIKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYIAKLSDFGFAKDGPEGEDTHVTTRIIGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLQLITGRRIIDKNRPSREQSLVEWARPLLRDQRKLHQFVDPRLEGRFPIRGAHKVAALAYKCLSHHPQPRPTMSDVINILEPLQHFDDAFIEPFVYVAINQDGRIN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0900 384 PANTHER OS01G0588500 PROTEIN-RELATED 39 362 - -
Alju08g0900 384 Gene3D Transferase(Phosphotransferase) domain 1 164 370 - -
Alju08g0900 384 CDD STKc_IRAK 87 361 - -
Alju08g0900 384 FunFam Serine/threonine-protein kinase BIK1 48 163 - -
Alju08g0900 384 SUPERFAMILY Protein kinase-like (PK-like) 58 361 IPR011009 -
Alju08g0900 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Alju08g0900 384 ProSiteProfiles Protein kinase domain profile. 81 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0900 384 Pfam Protein kinase domain 85 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0900 384 Gene3D Phosphorylase Kinase; domain 1 42 163 - -
Alju08g0900 384 FunFam Serine/threonine-protein kinase PBS1 164 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0900 Alju-ChrAlju08 6865793 6867233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0900 69 358 Glycoside Hydrolase AT3G07070 52.901 7.00e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju08g0900 Pkinase 2.3e-45 CL0016