Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0895 ATGCCTTTTACGGTGAAGCCCACGCTCTCACATGCGTTGCAAAAGCAGAGATATAAAGTAGTAAAAGTTACCAAGTGGCCTGTTATGGGGGGTGGTGGTAGAGTTGAAGTTGTAAGTAGCAAGGGATGCTCTGGATTCTTTTCACCTTCGTCGCATCTATTCAGGGGTTTGCATCTGCAACCTTTGGAGCCAATGACTCCTGTTTCATCTTTTCACGGTTCCGAACCAGTGGAAGGCCGATCAAGTGCTCCTTTTTCTGGTCTTGTCATATGCGTAACCGGTCTATCTAAAGAAGCAAGGAAACAGGTCATGGAGGCGACGGAGAGATTAGGTGGCCAATATAGCCCCCATTTACATCCTCAATGTACCCATTTGGTGTTTGAGCATGCACTGAAGCACGGCGCAAGAAATGGTCTTTTTACTGTCACACTGGGTTGGTTTGTCGATAGTGTTAAAAAAAATGTGAGGTTGAGTGAATCACTTTACAGTGTGAAGAATTATGGCAATAACAGTACGAACTTGGATGATTATAAACTGCTTTCCAGGTATACAAATGCTGAAAATTCCTGTCTTCCTGTAAGTTTTCACGAAACCAAGCGAAATGATAGAGCTGAAGAATTTCAAAGTTTTTCTGCACGTGAGTTTAGCAAGAATTTGGATTTGCCTTTATCTGGTTGCTCTATATATGTTGATCCAGACATCTCACCTGAATTGCGAACTAAGGTCGTTGAGACTGTTTCCCGAGAAGGTGCCAGTTTGATGGAACAGTGGTTTGTTGGTTGTAATGCTAGTCATGTAGTCACCGAAGGGGCATCAATTCAAAGATATCTTGGATATTCTAGTAACTTTGTTACACCACTGTGGATTCTAAAAACAGCCAAGGAGAAACAAGTGCAAAGGCTTGTTCACATGTCTGCTGATTTGGTGAGGCAAGTGGGTTTGATGCTTGAGGACATTCATAATGGCGTTACAGGGGAGGAATCACTTGAGCATAATCTCCCTGAAGATCTTCAGGGCGTCAAAAGTAAAGGAAGTTACAAAGACCGGCAGCAAGTTGTGAACTCTGCAAAAATAGGTGTCAGAAATCGCCGTGGTCGTCGGATGCAGACTTGTCAGACTCCAATGCGTCCTATAACACCTAACAACCTTCTGGATTCTATCTGCTGGTCAATATCTGAACCAACTTCAACAGCTTCCATTTACACCGACTCTTTCAGCGTTGAAGATGCTAGTGAAAATCACTTTTCCACCTTTGGTGATGCAAAGGGGGCCGTCAAAGATTTAGAAGCTTCATTTTCAAACTCTACTAGACCTCTAAGAGAAAGTGAGAAATCTGAACTGATATTTAAAAACCATTTTCTTACCATTCTCTTTCCAATTGATCGATTTGCCGAGATGGGTCCTTCATCAAGAACATTTTTCAGCCACAACGGCTTTACATGCCTTCAGGTGTTGGATCATATATATGCATTTTATCAGGAGAATTTGTTGGGGCACGAAATAGAAGCTGCAATTCATACAGATTCAAGACATGCGGATAGGCTTCGATCAGTGTATAGCAGTAAAGAAACAGAAGAACGTGGGTTTGTGATGTTCAAAAGGGTTGAGTTCTTGGGTAGTCGTACGAGTTTTGAAATGTTGAAACGTGTGACAGGGGACAACAACTCCAATGTCTACGAACTATTGCTCAGAGCCTAA 1698 0.4246 MPFTVKPTLSHALQKQRYKVVKVTKWPVMGGGGRVEVVSSKGCSGFFSPSSHLFRGLHLQPLEPMTPVSSFHGSEPVEGRSSAPFSGLVICVTGLSKEARKQVMEATERLGGQYSPHLHPQCTHLVFEHALKHGARNGLFTVTLGWFVDSVKKNVRLSESLYSVKNYGNNSTNLDDYKLLSRYTNAENSCLPVSFHETKRNDRAEEFQSFSAREFSKNLDLPLSGCSIYVDPDISPELRTKVVETVSREGASLMEQWFVGCNASHVVTEGASIQRYLGYSSNFVTPLWILKTAKEKQVQRLVHMSADLVRQVGLMLEDIHNGVTGEESLEHNLPEDLQGVKSKGSYKDRQQVVNSAKIGVRNRRGRRMQTCQTPMRPITPNNLLDSICWSISEPTSTASIYTDSFSVEDASENHFSTFGDAKGAVKDLEASFSNSTRPLRESEKSELIFKNHFLTILFPIDRFAEMGPSSRTFFSHNGFTCLQVLDHIYAFYQENLLGHEIEAAIHTDSRHADRLRSVYSSKETEERGFVMFKRVEFLGSRTSFEMLKRVTGDNNSNVYELLLRA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0895 565 Pfam twin BRCT domain 88 130 IPR001357 -
Alju08g0895 565 SMART BRCT_7 82 154 IPR001357 -
Alju08g0895 565 SMART BRCT_7 220 296 IPR001357 -
Alju08g0895 565 Pfam Family of unknown function (DUF6699) 472 549 IPR046522 -
Alju08g0895 565 Gene3D BRCT domain 83 166 IPR036420 -
Alju08g0895 565 ProSiteProfiles BRCT domain profile. 80 164 IPR001357 -
Alju08g0895 565 ProSiteProfiles BRCT domain profile. 218 298 IPR001357 -
Alju08g0895 565 SUPERFAMILY BRCT domain 87 177 IPR036420 -
Alju08g0895 565 CDD BRCT_TopBP1_rpt2_like 84 154 - -
Alju08g0895 565 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 31 565 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0895 72 164 Core DNA Replication Machinery Family AT1G77320 37.755 3.84e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0895 08 6830481 6836249 Alju08g0895 08 6830481 6836249 ECH