Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0893 ATGATTAAAGAGGGACCTACCTCGTTTATTTCAAAACGTGATCAACCCCATGTTACGACTCGTGTCCACTACTTACTTCAACCTCATCCTCATATCAACGACACTGTGATGCATCATCCTCCCCACAACTTGTATATAAATACGCATCACAATTCACCCCTCTTCAATCGTCAGCCAATAACTATAACATTCATTGGCATGCATGGTGAGAAGCCACCATTAATGGCTTCTCCGAATTCTACGACAACTGAGATGAGTGATCATGATCAGTGTTTAAAGTACAAAGGCGTGAGGAAGCGAAAATGGGGGAAATGGGTATCTGAAATCAGACTACCCAACAGCCGTGAACGCATATGGCTTGGCTCTTATGATTCAGCAGAAAAAGCTGCTCGAGCTTTTGATGCTGCACTCTTTTGTCTACGTGGCGATCGTGCCAATTTCAACTTCCCTGACACTCCTTTCCTCTTTCATATTCCTCATCATCCTCAACCTCTCACCCATCACCAGATTCAGCTTCTTGCTTCTTCCTTCGCCAATCAGCTCCACCACCACCACCAGCCGCCGCCGGAGCCACCCCATGAAACAGAACCATCTGCAGAATTTCATTCTGTAAGTCCTGTGTCAGTGTCCGAGACTGGTTCTAGTTCTTGTACTTCTTCTTCCTCTTGTATGCAAGTGGACGTGGAGGAGCACGGTGGTGACAGCACCATAGATTGGTCATTTTTGAACTCGCTAGATTCCGATGACCTGGGCGCTGCCATTGACTGTGGACTCTATTCTGAGTTAGATTACTTCCAGTTTTGTGAGTCGACGACGTCTTCCGAGTTATCTCTCATACCCCAAGACCTGCCCTTCGACTACAATAATGCCCAAGAGAATCAATACGAAGATGCTTATTCTCACAATTCATTCCTTTGGAACTTCGGATATGATTGTTAA 939 0.4558 MIKEGPTSFISKRDQPHVTTRVHYLLQPHPHINDTVMHHPPHNLYINTHHNSPLFNRQPITITFIGMHGEKPPLMASPNSTTTEMSDHDQCLKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGDRANFNFPDTPFLFHIPHHPQPLTHHQIQLLASSFANQLHHHHQPPPEPPHETEPSAEFHSVSPVSVSETGSSSCTSSSSCMQVDVEEHGGDSTIDWSFLNSLDSDDLGAAIDCGLYSELDYFQFCESTTSSELSLIPQDLPFDYNNAQENQYEDAYSHNSFLWNFGYDC 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0893 312 FunFam Ethylene-responsive transcription factor 2 93 151 - -
Alju08g0893 312 Pfam AP2 domain 93 142 IPR001471 GO:0003700|GO:0006355
Alju08g0893 312 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 80 238 - -
Alju08g0893 312 MobiDBLite consensus disorder prediction 181 221 - -
Alju08g0893 312 CDD AP2 93 152 IPR001471 GO:0003700|GO:0006355
Alju08g0893 312 MobiDBLite consensus disorder prediction 201 221 - -
Alju08g0893 312 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Alju08g0893 312 PRINTS Ethylene responsive element binding protein signature 116 132 IPR001471 GO:0003700|GO:0006355
Alju08g0893 312 ProSiteProfiles AP2/ERF domain profile. 93 150 IPR001471 GO:0003700|GO:0006355
Alju08g0893 312 SUPERFAMILY DNA-binding domain 93 151 IPR016177 GO:0003677
Alju08g0893 312 Gene3D AP2/ERF domain 93 151 IPR036955 GO:0003700|GO:0006355
Alju08g0893 312 SMART rav1_2 93 156 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0893 Alju-ChrAlju08 6807517 6808455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0893 93 179 AP2-EREBP Transcription Factor Family AT1G19210 68.966 2.54e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju08g0893 AP2 2.5e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0893 08 6807517 6808455 Alju08g0893 08 6807517 6808455 ECH