Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0872 ATGAAGATAGCAGTGGAGGGTTGCATGCATGGTGATCTCGATAATGTCTACAAAACTATTCAACATCTTGAAAAATTAAACAACACCAAAATCGATCTCCTCCTCTGCTGCGGCGATTTTCAGGCTGTACGAAACGAAGAAGATTTGAAGAGCTTGAATGTGCTCCCTCGTTATCGCTCCATGAATTCATTCTGGAAGTATTATTCGGGATTGGAGTTTGCCCCGTATCCGACAATATTCATTGGTGGAAACCACGAAGCATCTAATTATCTGTGGGAATTGTACTATGGAGGATGGGCCGCGCCTAATATATATTTCTTGGGAGCTGCGGGGGTGGTCAGGTTTGGGAATATCCGAATTGGTGGAGTGTCTGGGATTTATAATGCCCGTCATTATAAGTCAGGACATTTTGAGAGGCCTCCTTATGATCAAAGTACAATCAGGTCTGTGTATCATGTTCGTGAATATGATGTTCACAAGCTCATTCAAGTTGATGAACCAATTGATATCTTTCTTTCGCATGACTGGCCAGTGGGAATCACTGATTACGGGAATTGGAAGGATCTTATTCAGCGCAAACACTTTTTTAAGCGGGAGATAGAGGAAAGAAGGCTTGGGAGTAAAGCTGCTGCACAACTCCTGGAAAAATTGAAACCACAGTATTGGTTTTCAGCTCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGGGATGGTGGTCCTCAGACAAAATTTCTTGCACTTGATAAGTGCATTGCTGGTCGGGATTTCTTACAGATTGTGGAAATTGAATCAGAGGCAGGACCTTATGAAATTCAGTATGATGAAGAATGGTTAGCTATAACACGAAGGTTCAACTCTGTCTTCCCTCTTACTGCCAAAGCTGCAGATTTCAAAGGTATAGATCTTGAGATGGAGGACTGTCGTCAATGGGTTAGAAGCAGGCTGCAAGAGAGAGGGTACAAGCCTTTTGAATTTGTTAGAACTGCTCCATGTTACAATCCTTCTCAATCCAATGTTGAGGGTACCTTTGCTGTGAATCCTCAAAATCCGCAAACAGAATCTCTTTTGCAGCTCCTAGGACTTCCGTATCTTCTTGATAGCATTCCTGAACCACAGGGCTTACCACCTTATCCTTCTCCTTCAATTCAAGGAGGTCCCATTGGTTATGACAGCGAGGACATTCCAATTGAAGATGTAGATGATGTGGGTGATGATGAATAA 1227 0.4279 MKIAVEGCMHGDLDNVYKTIQHLEKLNNTKIDLLLCCGDFQAVRNEEDLKSLNVLPRYRSMNSFWKYYSGLEFAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGAAGVVRFGNIRIGGVSGIYNARHYKSGHFERPPYDQSTIRSVYHVREYDVHKLIQVDEPIDIFLSHDWPVGITDYGNWKDLIQRKHFFKREIEERRLGSKAAAQLLEKLKPQYWFSAHLHCKFAALVQHGDGGPQTKFLALDKCIAGRDFLQIVEIESEAGPYEIQYDEEWLAITRRFNSVFPLTAKAADFKGIDLEMEDCRQWVRSRLQERGYKPFEFVRTAPCYNPSQSNVEGTFAVNPQNPQTESLLQLLGLPYLLDSIPEPQGLPPYPSPSIQGGPIGYDSEDIPIEDVDDVGDDE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0872 408 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Alju08g0872 408 CDD MPP_Dbr1_N 3 259 IPR041816 -
Alju08g0872 408 Gene3D - 9 251 IPR029052 -
Alju08g0872 408 FunFam Lariat debranching enzyme 9 251 - -
Alju08g0872 408 MobiDBLite consensus disorder prediction 372 408 - -
Alju08g0872 408 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 404 - -
Alju08g0872 408 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Alju08g0872 408 SUPERFAMILY Metallo-dependent phosphatases 1 235 IPR029052 -
Alju08g0872 408 Pfam Lariat debranching enzyme, C-terminal domain 243 364 IPR007708 GO:0006397|GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0872 Alju-ChrAlju08 6628789 6632567 Dispersed