Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0860 ATGGAATCAACATGCGTGGACACCTCTCTCAACCTCAACGTTGGCCCCCGGGACACACAAGAAACCACGACTGAGGATTTGGTGCAAGAGTTGAATCGTTTAAACAGTGAGAATCAGAAGCTAACGGAGAGACTGACAAACTTGCGTGAGAACTACAATCTTTTGTTAAAGCAATTGAGCCAAGTGATGACCAACAACACCGATAATAATAGTAATCAATCATCAAGGAAGAGAAAAGCGGAGACGGAAGCCTGTAAGGATAATATGATTAGTATTAGCGGCAATAATACTGAGAGCATAAGCAACATTACCGACGAAGATTCATCGTTCAGAAGGCCATCCGCTAAGGTTACCAGAGTCATGGTGCGCACCCAACCATCAGATACTGGTCTGTATGTGAGGGATGGATATCAGTGGAGGAAATATGGTCAGAAGGTGACTCGAGATAACCCTTCTCCAAGAGCTTACTTCAGGTGCTCCGAAGCACCAAGCTGCCCTGTGAAAAAGAAGGTGCAAAGAAGTGCGGAAGACCCGACAGTGTTGGTGGCGACCTACGAAGGAGAGCACAACCATGGAGGACATGGATCTGAATTACCAACCCTAGCGTCGAACCAGAGCAAAAGTGAATCAGGAGGAGTAATATTGGGTGAAAATGGTGGGAAGTCAATGCAGCAGTGTTTGGTTCAGCAAATGGCCACTTCTTTGACCAGAGATCCCAACTTTACAGCTGCACTCGCCACCGCAATCTCCGGCAGAATTTTAAACCTTGCTTCTAATTAA 780 0.4615 MESTCVDTSLNLNVGPRDTQETTTEDLVQELNRLNSENQKLTERLTNLRENYNLLLKQLSQVMTNNTDNNSNQSSRKRKAETEACKDNMISISGNNTESISNITDEDSSFRRPSAKVTRVMVRTQPSDTGLYVRDGYQWRKYGQKVTRDNPSPRAYFRCSEAPSCPVKKKVQRSAEDPTVLVATYEGEHNHGGHGSELPTLASNQSKSESGGVILGENGGKSMQQCLVQQMATSLTRDPNFTAALATAISGRILNLASN 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0860 259 MobiDBLite consensus disorder prediction 187 216 - -
Alju08g0860 259 MobiDBLite consensus disorder prediction 1 22 - -
Alju08g0860 259 FunFam WRKY transcription factor 40 116 195 - -
Alju08g0860 259 Coils Coil 17 65 - -
Alju08g0860 259 Pfam WRKY DNA -binding domain 135 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g0860 259 Gene3D WRKY domain 116 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju08g0860 259 ProSiteProfiles WRKY domain profile. 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g0860 259 SUPERFAMILY WRKY DNA-binding domain 131 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju08g0860 259 MobiDBLite consensus disorder prediction 63 82 - -
Alju08g0860 259 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 219 253 IPR044810 GO:0003700
Alju08g0860 259 SMART WRKY_cls 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g0860 259 MobiDBLite consensus disorder prediction 92 108 - -
Alju08g0860 259 MobiDBLite consensus disorder prediction 197 212 - -
Alju08g0860 259 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0860 Alju-ChrAlju08 6542904 6544142 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0860 3 253 WRKY Transcription Factor Family AT1G80840 45.017 1.43e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju08g0860 WRKY 5.6e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2153 07 47622797 47624112 Alju08g0860 08 6542904 6544142 CCT