Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0859 ATGGAGGAAGAGAAAAATACAGTGTTTGGCAAGTATGAGATGGGCAGGCTTCTGGGCAAAGGGACTTTCGCCAAGGTGTATCACGGCAAACAGATAGCCACCGGCGAGAGCGTGGCCATCAAGATCGTGAGCAAGGAGCAGGTAAGGAAGGAGGGCATGATGGATCAGATAAAGCGAGAGATTTCCGTTATGCGATTGGTTCGTCACCCACACGTCGTTAAGCTCAAAGAAGTGATGGCCACAAAGACCAAAATTTTCTTCGTCATGGAGTACGTCCGCGGCGGCGAGCTCTTCGCCAAGGTCGCCAGAGGCAAACTCAAGGAGGATGTCGCTCGCAAGTACTTCCAACAATTAATCAGCGCCGTCGATTTCTGTCACAGCAGGGGAGTATCTCACCGGGATCTCAAGCCTGAAAATCTGTTGCTGGATGAGAACGAGAATCTCAAAATCTCCGACTTTGGCCTATCGGCGTTGCCGGAACAGCTCCGTCACGACGGTCTCCTCCACACCCAGTGTGGTACTCCGGCGTATGTCGCCCCCGAGGTGTTGAGAAAGAAAGGGTATGATGGGTCCAAGGCTGATATATGGTCGTGCGGTGTCATTCTGTATGCATTGCTCGCTGGGTTTCTTCCTTTTCAGAACGAGAATCTCATGAGTATGTATAGCAAGGTTTTAAAAGCCGAATTCCAATATCCGCCATGGTTTTCTGCTGAATCAAGGAGATTGATTTCGAAAATCCTCGTGGCTAATCCGGAGAGACGGGCTACGATCCCGGCAATAATGCGGGTCCCATGGTTTCTGAAAGGTTTCTCGAGGCCGTTCGCTTTTCAACTAGAGGAAACCGTTTCCGATGATAAGGAGCTGCAAAAATCAGAGCCTGCAAACCCAAGATCGAAACCTTCATCGCCCAAGTTTTTTAATGCGTTCGAGTTTATTTCGTCCATGTCTACTGGGTTTGATTTGTCTGGGTTGTTCGAGAGCAAGAAGAAAAAAGGGTCGATGTTCACATCCAAATGCTCGGCGACGGCGATCGTATCGAAGATTGAGACGGTGGCTAGAGGGCTGAGTTTTAAGGTAGGGAATGAGAAGGGTTTCAAGATGAGGCTGCAAGGGCCGTCGGAGGGGAGGAAAGGGAGGTTGACGGTAACGGCGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTCGTGGAGTTCTCAAAGAGCTCAGGCGATACTCTGGAATATGCAAAGTTTTGTGAGGAAGAAGTCAGGCCGGCGCTGAAAGACATAGTGTGGACGTGGCAAGGCGACAGCCCGGGCAATGATTACATGGGTGGCGGTTACGGAGAAGAATCTCAGGAACAAGTTGTTAGCAAAGTAGTATAG 1365 0.507 MEEEKNTVFGKYEMGRLLGKGTFAKVYHGKQIATGESVAIKIVSKEQVRKEGMMDQIKREISVMRLVRHPHVVKLKEVMATKTKIFFVMEYVRGGELFAKVARGKLKEDVARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENENLKISDFGLSALPEQLRHDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYALLAGFLPFQNENLMSMYSKVLKAEFQYPPWFSAESRRLISKILVANPERRATIPAIMRVPWFLKGFSRPFAFQLEETVSDDKELQKSEPANPRSKPSSPKFFNAFEFISSMSTGFDLSGLFESKKKKGSMFTSKCSATAIVSKIETVARGLSFKVGNEKGFKMRLQGPSEGRKGRLTVTAEVFEVAPEVAVVEFSKSSGDTLEYAKFCEEEVRPALKDIVWTWQGDSPGNDYMGGGYGEESQEQVVSKVV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0859 454 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Alju08g0859 454 ProSiteProfiles NAF domain profile. 301 326 IPR018451 GO:0007165
Alju08g0859 454 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0859 454 FunFam Non-specific serine/threonine protein kinase 301 425 - -
Alju08g0859 454 CDD STKc_SnRK3 11 265 - -
Alju08g0859 454 FunFam Non-specific serine/threonine protein kinase 5 303 - -
Alju08g0859 454 SUPERFAMILY Protein kinase-like (PK-like) 8 294 IPR011009 -
Alju08g0859 454 Gene3D Transferase(Phosphotransferase) domain 1 3 307 - -
Alju08g0859 454 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 422 - -
Alju08g0859 454 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0859 454 Pfam NAF domain 303 359 IPR004041 GO:0007165
Alju08g0859 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Alju08g0859 454 Gene3D Kinase associated domain 1, KA1 308 426 - -
Alju08g0859 454 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0859 454 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Alju08g0859 454 CDD CIPK_C 307 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0859 Alju-ChrAlju08 6536264 6537628 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0859 1 431 CBL-interacting serine-threonine protein kinases AT5G10930 68.879 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju08g0859 Pkinase 1.5e-74 CL0016