Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0849 ATGGCAAAGTGTCACCGGAACAACGTTGGACCCTTGATTCTCGATCGCCACGGTCCTACTACGAATGCAGCCGTCGGCGGCCACTTCCGCCTATGGAATGCGCTCTCGGCTTCCTCGTTCCGTCGTATCATTTTTGACGCCGTGAGCTGCGGCGGCAGCTCCCGTTATCACCACTCCCACTGTGATGACCTCAGCTCCACCGCCTCAACCACAACATCAACCTCTGGGAACTCGAAGGAGAAGCACCGAGAACAGAAGCAGGGATCATCCAAGTCTAAGCGTAACTCCAATGCGAGGTCCGAAAAATTATCGGATCTTTTGCATATAGAAAACTCCGAGAATCGCGCCGAAACTAAGAAGAAGGAAAACGCGTTGGAGGAGCTGAAGAACATTGTGCAGAAGTTGCAAGGAGAGGATTTGACGAAGCGACAAGTAGCAGCGTCAAATGTTAGATTGCTAGCCAAGGAAAACTTGGAAGTTAGAGGAAATCTCGCAATGCTTGGAGTCATTCCTCCTCTGGTTGGAATGCTCGACTTTGAAGACACTAACTCTCAAATCGCTTCTCTGTATGCGCTGCTCAATCTCGGAATCGGCAACGATGCAAATAAAGCAGCCATTGTCAAAGTTGGCGCTGTTCACAAGATGCTAAAGCTCATTGAATCTCCTGCTGCTCTGGATTCATCAGTCTCTGAAGCGATTGTTGCAAATTTCCTTAGCTTGAGTGCTTTAGATTCAAACAAACCAATCATTGGATCCTCTGGTGCAATACCTTTACTGGTTAGAACCCTTAAAAATTTAGACAATTCATGTAGCCATCAAGCTAAGCAAGATGCTCTGCGAGCACTGTACAATCTTTCAATCTTCCCAACCAATATCTCATGCATTTTGGAAACCGATTTGGTTCCACATCTAATAAACACATTAGGAGACATGGAGGTGAGTGAAAGAGTCCTTCCCATATTGAGCAATCTGGCATCTACACCAGAGGGCCGAAAAGCTATTAGTTCTGTGCCAGAAGCATTTCCAATTCTGGTTGATGTATTAAACTGGACAGATGCACCAGGTTGCCAAGAGAAAGCTTCCTACATTTTGATGATCATGGCACATAAAGCTTATGGAGACAGGCAGGCCATGATTGAAGCTGGGATTGTATCATCATTGTTTGAGTTGACACTTTTGGGTACCCCATTGGCACAAAAAAGAGCCTCAAGGATATTACAATGTCTGAGAGTAGTTAAAGGCAAGCAGGTTTCTGGGAGTTGCAGTGGGAAGTTCCATACAAATGTCTCTGCTCCTATTTGTGGCTCTTCATCATCGTCTTGTACAAAGCCACGTGGAGGTGGTAGAAGGTCTTTGGAGGGAGATGAAGATATGATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCGACAGAGTTTGCAGAATAACATGAGGAAAATTGTAAAGAGGGCTAACATCCCTCAGGATTTTGTTCCATCTGAACATTTCAAGTCACTCACTTCAAGTTCGACTTCGAAGAGCCTGCCGTTTTGA 1539 0.4561 MAKCHRNNVGPLILDRHGPTTNAAVGGHFRLWNALSASSFRRIIFDAVSCGGSSRYHHSHCDDLSSTASTTTSTSGNSKEKHREQKQGSSKSKRNSNARSEKLSDLLHIENSENRAETKKKENALEELKNIVQKLQGEDLTKRQVAASNVRLLAKENLEVRGNLAMLGVIPPLVGMLDFEDTNSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPAALDSSVSEAIVANFLSLSALDSNKPIIGSSGAIPLLVRTLKNLDNSCSHQAKQDALRALYNLSIFPTNISCILETDLVPHLINTLGDMEVSERVLPILSNLASTPEGRKAISSVPEAFPILVDVLNWTDAPGCQEKASYILMIMAHKAYGDRQAMIEAGIVSSLFELTLLGTPLAQKRASRILQCLRVVKGKQVSGSCSGKFHTNVSAPICGSSSSSCTKPRGGGRRSLEGDEDMMMSEEKKAVKQLVRQSLQNNMRKIVKRANIPQDFVPSEHFKSLTSSSTSKSLPF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0849 512 MobiDBLite consensus disorder prediction 59 121 - -
Alju08g0849 512 SMART arm_5 157 197 IPR000225 GO:0005515
Alju08g0849 512 SMART arm_5 288 326 IPR000225 GO:0005515
Alju08g0849 512 SMART arm_5 199 242 IPR000225 GO:0005515
Alju08g0849 512 SMART arm_5 243 287 IPR000225 GO:0005515
Alju08g0849 512 MobiDBLite consensus disorder prediction 436 458 - -
Alju08g0849 512 Coils Coil 109 138 - -
Alju08g0849 512 Gene3D - 101 267 IPR011989 -
Alju08g0849 512 SUPERFAMILY ARM repeat 127 409 IPR016024 -
Alju08g0849 512 Gene3D - 268 414 IPR011989 -
Alju08g0849 512 MobiDBLite consensus disorder prediction 77 121 - -
Alju08g0849 512 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0849 Alju-ChrAlju08 6445983 6447800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0849 117 410 U-box Gene Family AT2G23140 33.446 3.01e-32 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2160 07 47719395 47722300 Alju08g0849 08 6445983 6447800 CCT