Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0841 ATGGAACGAGTTTGTGACAAGGTTCCTCCTAGTCCAAGTACTCCATTGCAGAGCCCAAAGGAGAAGAAACACCTCTCTGTTGAGGAGGAGAAAGAAGAAGAAGAAGAGGAAAAAACATATTCTTTGTTAGATCTGAACGTGAATAGTGACGATTCTGCTGTTGGGTGCAATACAGAACTGCATCTCTTGGCCAATTTGGATGTAGGTATGGAGAAATCTAAAACATCCGAAAATTCTGGTGCTTTAGAGGCAGAGCCACGTGTATTCTCTTGCAAGTACTGTCAGAGGAAGTTTTACAGTTCACAAGCGCTCGGAGGACACCAAAATGCGCATAAGAGGGAGAGATTAATAACGAAAAGAGGGCAGAGGGAGATAATGGCCTCTGCTACAGACTTTGGGACTCCTTTTCTGCTTCATAATCACAGGTTTACAAGTATGGCGTCTCTACCCCTCCACGGTGCTGCTGGAAATAAACCTCTTGGAATTCAGGCACACTCCATGATTCACAAGCCTTCTCATATTTCTTCTAATTTTGGGTTTGGAAACAGCCATGGATATCATGTCTGGTCAAGGCCCCTGCTTGATCAGAAACCCAGAATAGGGAAGCTAGAGATGGCTAATTTTCAGAGAGCAACAACATTAGGCTTGTCATCACGAGGCAGTGTAGGTAGGTTTGAAACGGTAAAGACGACGGTTGGTTCTGGAGTCGGTGAGGAAATCACTGGGTATTTGGTAAGTGGAACTCTATTGAAGACTGATCAAGAAGAAACAAAGCACCTTGATTTATCCCTCAAGCTCTAG 801 0.4419 MERVCDKVPPSPSTPLQSPKEKKHLSVEEEKEEEEEEKTYSLLDLNVNSDDSAVGCNTELHLLANLDVGMEKSKTSENSGALEAEPRVFSCKYCQRKFYSSQALGGHQNAHKRERLITKRGQREIMASATDFGTPFLLHNHRFTSMASLPLHGAAGNKPLGIQAHSMIHKPSHISSNFGFGNSHGYHVWSRPLLDQKPRIGKLEMANFQRATTLGLSSRGSVGRFETVKTTVGSGVGEEITGYLVSGTLLKTDQEETKHLDLSLKL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0841 266 MobiDBLite consensus disorder prediction 1 37 - -
Alju08g0841 266 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Alju08g0841 266 Gene3D Classic Zinc Finger 69 134 - -
Alju08g0841 266 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 17 266 IPR044246 GO:0009788
Alju08g0841 266 SUPERFAMILY beta-beta-alpha zinc fingers 86 117 IPR036236 -
Alju08g0841 266 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0841 Alju-ChrAlju08 6332538 6333338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0841 25 266 C2H2 Transcription Factor Family AT5G10970 41.434 2.01e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju08g0841 None None None