Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0835 ATGAAGCTTCTTTTGTTGCTTCCTTTTCTTCAAGGTCCCATTTGGGTTTGTGCTGCGGCCGAAACCCCACTTTTGTCGCCCACAGTCCCACCTTTGTCCCAAGCATCAATGGCGCCATTTTCTCCAGATATTCAGGTGGAGAATGAATGGAAACCAACATATTTAGACATGAAAGTGGTAATAGCTCTCATCGTAGCCGGAACTGCACTTGGTGCCGTCATTTTGTCTTTCTTATGCTTCTGCATTTGTTACAAGAAACGTCTGTCCAAATTCAACAGGAAAAATATCCAAAGCTTAGATGTGGAGAAAGGGCTTGCGAGAACCTCATCTTTGACAAAATTTAGTTCATTCAAGATGGATGGTAAGAAGGGGTCTATTTCGATATTTGATTATAAGACAATACAAAAGGCGACAAGCAATTTTCTGGAAACTAATATCTTGGGAGAGGGTGGATTTGGATGCGTTTACAAGGCTCGATTGCATCATAACTTGGATGTTGCCGTCAAGAAATTGAACTGCGAAAGTCAGGACGCTCAGAGAGAGTTTCAGAACGAGGTGGACATGTTAAGTAAAATTCAGCATCCAAATATAATCTCTTTGCTGGGTTGTAGCAGCAATGGTGACACGAGGTTTATTGTCTATGAATTGATGCAAAATGGATCATTGGAGACTCAATTACATGGACCCTCTCATGGATCGGCGTTGACTTGGCACATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTAGAGTATCTGCATGAAATCTGTAACCCACCAGTGATCCATAGAGATCTGAAATCATCTAATATTCTCTTGGACGCAAATTTCAATGCCAAGCTGTGTGATTTCGGATTTGCCATAGCTGATGGGTCCCAAGACAAGAATGACATAAAACTCTCAGGCACATTGGGATATGTAGCTCCTGAATATATATTAGATGGTAAATTAACCGATAAAAGCGATGTGTATGCATTCGGAATTGTGCTTCTAGAACTTGTGTTAGGGAGGAAGCCAGTGGAAAAGCTAACAGCAACACAGTGCCAGTCTATAGTCACATGGGCGGTGCCACAGCTCAGCGACAGATCCAAGCTTCCCAACATTGTGGATCCCATGATCAAGAATACAATGGATCTCAAGCATTTATATCAGGTTGCTGCCACGGCGGTGCTGTGCGTGCAACCGGAACCGAGTTACCGTCCATTGATTACAGATGTTCTGCACTCTCTCATCCCTCTTGTTCCAGTAGAGCTTGGAGGAACACTAAGAGTTCCACAAGCGTCGCAGCCTCCTTCTTCAACATGA 1308 0.4343 MKLLLLLPFLQGPIWVCAAAETPLLSPTVPPLSQASMAPFSPDIQVENEWKPTYLDMKVVIALIVAGTALGAVILSFLCFCICYKKRLSKFNRKNIQSLDVEKGLARTSSLTKFSSFKMDGKKGSISIFDYKTIQKATSNFLETNILGEGGFGCVYKARLHHNLDVAVKKLNCESQDAQREFQNEVDMLSKIQHPNIISLLGCSSNGDTRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDTARGLEYLHEICNPPVIHRDLKSSNILLDANFNAKLCDFGFAIADGSQDKNDIKLSGTLGYVAPEYILDGKLTDKSDVYAFGIVLLELVLGRKPVEKLTATQCQSIVTWAVPQLSDRSKLPNIVDPMIKNTMDLKHLYQVAATAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGTLRVPQASQPPSST 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0835 435 FunFam Protein kinase superfamily protein 108 216 - -
Alju08g0835 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Alju08g0835 435 Gene3D Transferase(Phosphotransferase) domain 1 217 416 - -
Alju08g0835 435 Pfam Protein tyrosine and serine/threonine kinase 145 368 IPR001245 GO:0004672|GO:0006468
Alju08g0835 435 CDD STKc_IRAK 147 414 - -
Alju08g0835 435 ProSitePatterns Protein kinases ATP-binding region signature. 147 170 IPR017441 GO:0005524
Alju08g0835 435 SMART serkin_6 141 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0835 435 ProSiteProfiles Protein kinase domain profile. 141 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0835 435 SUPERFAMILY Protein kinase-like (PK-like) 122 411 IPR011009 -
Alju08g0835 435 FunFam probable receptor-like protein kinase At1g80640 217 416 - -
Alju08g0835 435 Gene3D Phosphorylase Kinase; domain 1 101 216 - -
Alju08g0835 435 PANTHER OS01G0750732 PROTEIN 60 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0835 Alju-ChrAlju08 6280152 6282766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0835 59 415 Receptor kinase-like Gene Family AT3G58690 42.149 8.05e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Alju08g0835 PK_Tyr_Ser-Thr 2.5e-49 CL0016