Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0821 ATGCATCTGCCTGTAGGGAGAGCTGGTAGATATGGGTCTAAGTTTCCTATTGGGGAAGTAAAATGCTTGGATGCAGAAGATCTACCCTTGCTTCATTCATCATTAAATTCTCGATCACCCACTTTAGAGCGTGCTGGGATACTTCCTCCTTATGATCTCATGTATATGCACTCACGATTACACCCCAAAGATAGTTTCACACAGATACTGGACCCAAACAAGGAGACCAACGACGGCGGGAGAAAGCAGCGGCATCTCTGTCAAATGGGTACTCTTCTGAAATGCTACAGACCCTTCTTCTTGATGCTTCCCTATCCGGCTCGAACGATTCAAATCAGAACCAACCAGTTGAGCCCCGCCAGCATTTTCAGGAGGAAGAAGCTGGGTTCGGTTACTCGTTGCTTTAGTGCCAGTTCTTTGCGGTCGTCCCAGCCATCGGTCACTGAACAGAGCTTCGGGAAATCCGACCGGGAGAGGGTTAGGAATCCACCGCCGGAGCTGTGGCTTTATAACACGATGAGTAAAGAGAGAGAGCTGTTTAAACCTAAAGTGGAAGGAAAAGTTGGAATGTATGTCTGCGGAGTCACTGCATATGATCTGAGCCATATTGGACATGCTCGCGTCTATGTCAATTTTGACGTTCTTTACAGATATCTTAAGCATATGGAATTTGAAGTCTCTTATGTTCGTAATTTTACTGACGTAGATGACAAGATAATTGCTAGAGCAAATGAGTTAGGAGAGGATCCAATAAGTTTGAGCCGACGCTATTGTGAAGAGTTTAGTCAAGACATGACAACTCTTCATTGTCTACCACCTTCTATGGAGCCACGAGTTTCAGAGCACATGCCCCAAATAATTAATATGATTGAGCAGATTATCAATAATGGGTATGCCTACATTGTTGATGGGGATGTGTACTTTGACGTTGAAAATTTTCCAGAATATGGGAAGTTATCTGGACGAGATCTTGAAGATAATCGAGCTGGTGAGAGGGTTGCTGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTCTTTGGAAGTCTGCAAAGCCAGGAGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGGTGGCATATTGAATGCAGTGCTATGAGTGCAGCTCATCTTGGTCACTCTTTTGATATCCATGGTGGAGGGATCGACCTTGTGTTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCATGTAAGAAAAGTAATATAAGTCTCTGGATGCACAATGGTTTTGTCACTGTGGACTCAGAGAAGATGTCCAAATCTCTGGGAAATTTTTTCACCATACGACAGGTTGTAGACGTTTACCATCCACTGGCTTTGAGATATTTTTTGATGGGAGCCCATTATCGATCTCCTATTAACTACTCTCATGTCCAGCTTGAAAGTGCTTCAGACCGTGTTTTCTACATATATGAGACTCTACATGAATGTGAAAGCTTTCTGTGCCAACATGATCTCACAAATAGGAAGGATTCCATCCCAACTGATACTCTAGATATTATTAATAAGTTTCATGATGTTTTTGTGGCTTCAATGTCCGATGACCTTCATACCCCAGTTGTATTGGCTGCGCTGTCTGACCCATTAAAAGCAATCAATGATCTACTACATACTCGTCAGGGGAGGAAACGAGCATTGCGAATCGAATCACTTTCAGCTCTGGAGAAGAGTATCAGGAACGTTTTGACTGTTTTAGGACTTATGCCTGCAAGTTATTCTGAGGTTTTACAGCAGCTAAATGAAAAGGCTTTAAAGCGTGCAAATTTGACAGAAGAACAAGTCTTACAGAAAATTAAAGAACGGGCTGCTGCTAGAATGAACAAGGAGTATGAAAAGTCAGATGCAATTAGGAATGATTTGGCAGTTTTAGGTATTGCTCTGAAGGACAGTCCGGATGGTACAACGTGGAGGCCCACCATTCCTCTTTCACTTCAAGAATAG 1980 0.4318 MHLPVGRAGRYGSKFPIGEVKCLDAEDLPLLHSSLNSRSPTLERAGILPPYDLMYMHSRLHPKDSFTQILDPNKETNDGGRKQRHLCQMGTLLKCYRPFFLMLPYPARTIQIRTNQLSPASIFRRKKLGSVTRCFSASSLRSSQPSVTEQSFGKSDRERVRNPPPELWLYNTMSKERELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVNFDVLYRYLKHMEFEVSYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFSQDMTTLHCLPPSMEPRVSEHMPQIINMIEQIINNGYAYIVDGDVYFDVENFPEYGKLSGRDLEDNRAGERVAVDSRKKNPADFALWKSAKPGEPFWESPWGPGRPGWHIECSAMSAAHLGHSFDIHGGGIDLVFPHHENEIAQSCAACKKSNISLWMHNGFVTVDSEKMSKSLGNFFTIRQVVDVYHPLALRYFLMGAHYRSPINYSHVQLESASDRVFYIYETLHECESFLCQHDLTNRKDSIPTDTLDIINKFHDVFVASMSDDLHTPVVLAALSDPLKAINDLLHTRQGRKRALRIESLSALEKSIRNVLTVLGLMPASYSEVLQQLNEKALKRANLTEEQVLQKIKERAAARMNKEYEKSDAIRNDLAVLGIALKDSPDGTTWRPTIPLSLQE 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0821 659 PANTHER CYSTEINYL-TRNA SYNTHETASE 159 657 IPR024909 -
Alju08g0821 659 FunFam Cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 469 651 - -
Alju08g0821 659 PRINTS Cysteinyl-tRNA synthetase signature 355 373 IPR024909 -
Alju08g0821 659 PRINTS Cysteinyl-tRNA synthetase signature 386 407 IPR024909 -
Alju08g0821 659 PRINTS Cysteinyl-tRNA synthetase signature 190 201 IPR024909 -
Alju08g0821 659 PRINTS Cysteinyl-tRNA synthetase signature 226 235 IPR024909 -
Alju08g0821 659 SUPERFAMILY Nucleotidylyl transferase 166 476 - -
Alju08g0821 659 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 506 651 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Alju08g0821 659 Gene3D - 470 651 - -
Alju08g0821 659 CDD CysRS_core 168 469 IPR032678 -
Alju08g0821 659 Coils Coil 585 605 - -
Alju08g0821 659 Gene3D - 29 102 - -
Alju08g0821 659 NCBIfam cysteine--tRNA ligase 167 650 IPR015803 GO:0004817|GO:0005524|GO:0006423
Alju08g0821 659 Hamap Cysteine--tRNA ligase [cysS]. 167 652 IPR015803 GO:0004817|GO:0005524|GO:0006423
Alju08g0821 659 FunFam Cysteine--tRNA ligase 166 467 - -
Alju08g0821 659 Pfam tRNA synthetases class I (C) catalytic domain 180 476 IPR032678 -
Alju08g0821 659 SMART dalr_2_4 520 589 IPR015273 GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423
Alju08g0821 659 Pfam DALR domain 521 581 IPR015273 GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423
Alju08g0821 659 Gene3D HUPs 148 469 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0821 Alju-ChrAlju08 6191380 6196026 Dispersed