Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0800 ATGTCTCATTTGCTGCACGGGAAGCTTCATGTAATCATATATGAGATCGACAAGCTTCATTCTGGACTCAACCTCAGTGTCAACAACCAGGGTGCAAGAAACATTGGGAAGAAAGTTCTTACCAGAGTCGAGAGCGTATTACGAATCAAGCCTAAGTCTAAGATAGCTGGGACTAGAATGTATGCAACTATTGATTTAGATAAAGCAAGAGTTGGGCGAACAAGAATGATACGCCAAGCTTCTAAACCAAAATGGAACGAGATGTTTCATATATATTGTGCTCATTCCATTTCTGAGATCATATTCACTGTCAAATATGATAATCCAATTGGAGCAACTCTAATTGGAAGAGCTCATGTAGCTGCTGAGCAAGTCCTCAAGGGTAACGTAGTGGATACATGGGTTGCAATCTTAGATGAGGATCGTCGTCCCATACGAGGTGGTTCTAGAATACATGTCAGAATGCAATTCTTTGATGTTACTCAGGATGTAACTTGGTCTCAAGGAATCAAAAGCCATCGACACGCCGGTGTTCCTCGTACCTTCTTTACTCAAAAAGTTGGCTGCAAAGTTACTTTGTACCAAGATGCTCATGTCCCAAATGCTTATCTTCCTAGGATTCGTTTGTCTGAAGGAAGATATTATGAGCCTAGTAGATGTTGGGAGGACATTTTTAATGCAATCACAAATGCTAGGCACTTGATTTACATAACTGGCTGGTCTGTGTATACTGAAATAACCTTGATAAGGGACCTAAGGAGGCCAATTTCTGGTGGAAACATCACTCTTGGGGAACTATTGAAGAAGAAAGCTGATGAAGGTGTTAATGTTCTTATGCTTGTGTGGGATGATAGAACCTCTGTTGAAGAGTTAAAGAAAGATGGGCTAATGGCGACCCATGATCAAGAAACAGAAGAGTATTTCAGGAACACGAAAGTGAAGTATGTGTTATGTCCACGTAACCCAGATGATGGACGTAGCATAATTCAAGGTTTTGAGATTTCAACAATGTTCACTCATCATCAAAAGACAGTGATCGTTGACAGTGAAGTTCCCGGCGGTGGCGGAGGAGGATCTCAGAGGCGAAGGATAGTGAGTTTCATCGGCGGTATTGATCTGTGTGATGGGAGATATGACACACAAGAACATCCTTTATTTTCAACTCTAAACACAACCCATCATAATGATTTTCACCAGCCAAATTTCCCAGGAGCTTCAATTAAAAAAGGAGGCCCAAGAGAGCCATGGCATGATATTCATTGCAAATTAGAAGGGCCAGTGGCTTGGGATGTCTTGTTCAACTTTGAACAAAGGTGGGAGAAACAAGTTGGGAAGCAATTCTTACTCCCTTCTAGATTGCTTGATCAGATTCTAGTGCCTCAATTTTATACAGGGACATGGAACGACAGAGACGCGTGGACTGTTCAATTGTTCAGATCCATTGATGGTGGTGCAGCTTCTGGTTTTCCTCAAGACCCATCAAAAGCATATGCATTAGGCCTTGTTAGTGGGAAAAATAACGTTATTGATAGAAGTGTTCAGGATGCTTACATAAATGCTATTAGGCGAGCCAAGAACTTCATCTACATTGAAAACCAGTATTTTCTAGGGAGCTCATATGGTTGGAAAGGGTCTGACATAAAAGTTGAAGATATTGGGGCTTTGCATCTTATACCAAAGGAGCTATCTTTGAAGATTGTGAGCAAGATTGAAGCAGGAGAAAGGTTTGCTGTGTACATTGTGATCCCGATGTGGCCAGAAGGTATCCCTGACAGTGGTTCTGTTCAAGCAATATTGGATTGGCAAAGAAGGACAATGGAGATGATGTATACTGATATTGCTGCTGCTATTCAGAGAAAAGGAATCAGAGCCCACCCTAGAGATTACTTGACATTTTTCTGCCTTGGAAATCGAGAGACTGAGAAACCTGGAGAATATGTTCCTCCTGAGAGACCAGATCCTGACAGCAATTACAGCAAAGCACAAAATGCCAGGCGCTTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATAAACCAGAGATCAATGGATGGTGCAAGGGACACTGAGATTGCAATGGGTGCATTCCAAGCATATCATCTTGCATCCTATGGCCCACCCAAAGGTCAGATATATGGGTTTAGACGAGCTTTATGGTACGAACATCTTGGGGAACCTGAAGGTGATGAAGCCTTTGACCATCCAGAGAGTGAACATTGTGTGAAGCTTGTGAATTATCTCTCAGACTTGAATTGGGAAAAATATTCAAATCAAACCTTTGATCGACAAAGTTCATTCAACCACCTCATGCGTTACCCTATAGATATAACCAAAGATGGCAATGTAACAAAACTACAAGACTTTGAATTCTTTCCTGACACTGAGGCTTCTGTTCTTGGCTCCAAATCAAGCCTTCCTCCAATCCTCACCACCTAG 2472 0.4167 MSHLLHGKLHVIIYEIDKLHSGLNLSVNNQGARNIGKKVLTRVESVLRIKPKSKIAGTRMYATIDLDKARVGRTRMIRQASKPKWNEMFHIYCAHSISEIIFTVKYDNPIGATLIGRAHVAAEQVLKGNVVDTWVAILDEDRRPIRGGSRIHVRMQFFDVTQDVTWSQGIKSHRHAGVPRTFFTQKVGCKVTLYQDAHVPNAYLPRIRLSEGRYYEPSRCWEDIFNAITNARHLIYITGWSVYTEITLIRDLRRPISGGNITLGELLKKKADEGVNVLMLVWDDRTSVEELKKDGLMATHDQETEEYFRNTKVKYVLCPRNPDDGRSIIQGFEISTMFTHHQKTVIVDSEVPGGGGGGSQRRRIVSFIGGIDLCDGRYDTQEHPLFSTLNTTHHNDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVLFNFEQRWEKQVGKQFLLPSRLLDQILVPQFYTGTWNDRDAWTVQLFRSIDGGAASGFPQDPSKAYALGLVSGKNNVIDRSVQDAYINAIRRAKNFIYIENQYFLGSSYGWKGSDIKVEDIGALHLIPKELSLKIVSKIEAGERFAVYIVIPMWPEGIPDSGSVQAILDWQRRTMEMMYTDIAAAIQRKGIRAHPRDYLTFFCLGNRETEKPGEYVPPERPDPDSNYSKAQNARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAMGAFQAYHLASYGPPKGQIYGFRRALWYEHLGEPEGDEAFDHPESEHCVKLVNYLSDLNWEKYSNQTFDRQSSFNHLMRYPIDITKDGNVTKLQDFEFFPDTEASVLGSKSSLPPILTT 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0800 823 Gene3D Endonuclease Chain A 209 455 - -
Alju08g0800 823 SUPERFAMILY Phospholipase D/nuclease 513 740 - -
Alju08g0800 823 Gene3D C2 domain 23 169 IPR035892 -
Alju08g0800 823 PANTHER PHOSPHOLIPASE D 4 813 IPR015679 -
Alju08g0800 823 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 336 377 IPR001736 GO:0003824
Alju08g0800 823 Gene3D Endonuclease Chain A 483 708 - -
Alju08g0800 823 ProSiteProfiles C2 domain profile. 1 135 IPR000008 -
Alju08g0800 823 Pfam Phospholipase D Active site motif 336 377 IPR001736 GO:0003824
Alju08g0800 823 Pfam Phospholipase D Active site motif 668 694 IPR001736 GO:0003824
Alju08g0800 823 SUPERFAMILY Phospholipase D/nuclease 162 449 - -
Alju08g0800 823 Pfam Phospholipase D C terminal 741 814 IPR024632 -
Alju08g0800 823 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 667 694 IPR001736 GO:0003824
Alju08g0800 823 FunFam Phospholipase D delta 211 457 - -
Alju08g0800 823 SMART C2_3c 24 134 IPR000008 -
Alju08g0800 823 SMART pld_4 336 377 IPR001736 GO:0003824
Alju08g0800 823 SMART pld_4 667 694 IPR001736 GO:0003824
Alju08g0800 823 CDD C2_plant_PLD 4 158 - -
Alju08g0800 823 FunFam Phospholipase D 480 713 - -
Alju08g0800 823 PIRSF PLD_plant 1 823 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Alju08g0800 823 Pfam C2 domain 27 136 IPR000008 -
Alju08g0800 823 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 49 160 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0800 Alju-ChrAlju08 6014866 6018772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0800 3 823 Phospholipase D Gene Family (Wang group) AT3G15730 64.563 0.0 1108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0800 08 6014866 6018772 Alju05g1520 05 45440980 45445464 ECH
Alju08g0800 08 6014866 6018772 Alju11g0847 11 10075735 10079025 ECH
Alju08g0800 08 6014866 6018772 Alju08g0800 08 6014866 6018772 ECH