Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0799 ATGGCGAGTTTGTTACATGGGACGCTTTGTGTAACCATATATGATGTTGATAGGCTGCACAACAGATGTAACTTAGATTTTTGCAACAAGGATACACCTCATCGAGGGAAGAGATTTCTAGCCCAAGTCAAAGGTTGTTTGCTGTGTCGACCAGAGCTTGTTGGGACAAGACTATATGCAACAGTTGATTTAGACAAAGCCAGAGTTGCCAGAACCAGAATGATCCGACATCAAACCTCCAATCCCAAGTGGAATGAGACATTTCACATATATTGTGCCCACCAGGTGTCGAACATTGTATTCACAGTCAAAGATGGAAACCCCATTGGAGCAACACTAATTGGAAGAGCTTATGTCCCTGTAGATCAAGTTCTGACTGGGGGCCCACTAAACAGACAAGTTGAGATTTACGATGAAGACCTTCATCGTCCCATACAAGGTGACTCTAAAATACATGTCAAAATAGAATTCAACCATGCGGTCAACGATCCATACTGGTCTAGAGGAATAAAGACTGCAGATTTTCCTGGAGTTCCTCATGTGTTCTTTAACCAGAGAGAAAATTGCAAAGTCACTTTGTACCAAGATGCTCATGTCCTTAATGATTTTATTAAGGTATCTATCCCACTGTCCAGTGGAATCGGATATTATAATCCAGGAAGATGTTGGGAGGACATTTTCAGTGCCATTTATAATGCTAAGCACTTGATTTACATAACTGGCTGGTCTGTTTATACTGAAATAACCTTAATTAGGAACTCAGATAAGCCATCCATGACTCTGGGCAAGTTGCTTTTGATGAAAGCTGATGAAGGAGTGAAAGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGATGAGCTCAGAAAAGTTGGGTTAATGGGAACTCATGATGAAGAAACAGCACAGTACTTTAAGAATACTAAAGTACAATGTGTGTTGTGTCCCAGAAATCCTGATGTTGGAAGGAGCATAATTCAAGGGCTTCAAACTTCAACTATGTTCACTCACCACCAAAAGGCAGTGGTAGTTGACAGTGACTTACCTGACATACATGGAGAGTCCCAGGGAGGATTACAAAAGAGGACTATTGTCAGTTTTATTGGTGGAATTGATCTGTGTGATGGGCGATATGATACGCATGAGCATCCTTTGTTTTCGACTCTGAACACGATTCATAAAGACGATTTTCATCAGCCAAACTTTGCTGGAGCTTCAATTAAGAAAGGTGGTCCAAGAGAGCCCTGGCATGACATACATTGCAAGCTAGAAGGGCCTATTGCTTGGGATGTCTTGTACAATTTTGAGCAGAGGTGGGAGAAGCAAGTTGGGAAGCACTTTCTTACACCATTAGAAGACTATGATGAGATTATTGTGTCTCCATCTGAAATAAAACCATTAGAAGACAATGAGACATGGACTGTTCAGTTGTTCAGGTCCATTGATGGTGGTGCTGTTTCTGGTTTTCCTAGGACACAAGACGAGGCAGCCGAGTGGGGCCTAGTCAGTGGGAAAAACAACATCATAGATAGAAGCATTCAGGATGCTTACATAAACGCTATTAGGCGAGCCAAGAACTTCATCTATATCGAAAACCAGTATTTCCTGGGGAGCTCATATGGCTGGAAAGCAACTGATTTAAAAGTTGAAGATATTGGGGCTCTACATCTTATACCAAAGGAGCTATCTTTGAAGATTGTGAGCAAGATTAAAGCAAGAGAGAGGTTTGTTGTGTACATTGTGATCCCAATGTGGCCAGAAGGTGATCCTGAAAGTGCTTCAGTTCAAGCAATATTAGATTGGCAGAGGAGGACAATGGAGATGATGTATACTGAAATAGCTGAAGCCATTGAACAAGTAGGATCTAAGGCCCTTCCCACAGAATATCTCACTTTTTTCTGCCTTGGAAATAGAGAGGTAGAGAAACCTGGAGAATATATTCCTCCAGAGAGACCAGTTCCTGATACTAACTATGATAGAGCACAAAAAACCAGGCGCTTCATGATCTATGTTCATTCAAAGATGATGATAGTTGATGATGAGTATATAATAGTTGGTTCAGCGAACATAAACCAGAGATCAATGGACGGAGGAAGAGACACAGAAATAGCAATGGGGGCATTTCAACCACATCATCTAACAGAGGAAGAGAACAGACCAAAAGGTCAGATTCATGGATTCAGAAGGGCTTTATGGCTTGAGCATCTTGGAGATGTGGATGCTTTAGTGTTGGACCATCCAGAGAGAGAAGAATGTCTGAAGATTGTGAATTTTATTGCTGAAGAAAACTGGAAATTATACACGAAGGAAACGTTCGATGAAGGTAATTCAATTGGTTTTAATCATCTCTTGCGTTACCCCATTGATATAACCAAAAGTGGGCAAGTAATTGCATTGGAAGGGTTTGAGTTCTTTCCTGACACAAAGGCTTGTATTCTGGGTACCAAATCTGACTACCTTCCTCCTATCCTCACCACCTAG 2481 0.4127 MASLLHGTLCVTIYDVDRLHNRCNLDFCNKDTPHRGKRFLAQVKGCLLCRPELVGTRLYATVDLDKARVARTRMIRHQTSNPKWNETFHIYCAHQVSNIVFTVKDGNPIGATLIGRAYVPVDQVLTGGPLNRQVEIYDEDLHRPIQGDSKIHVKIEFNHAVNDPYWSRGIKTADFPGVPHVFFNQRENCKVTLYQDAHVLNDFIKVSIPLSSGIGYYNPGRCWEDIFSAIYNAKHLIYITGWSVYTEITLIRNSDKPSMTLGKLLLMKADEGVKVLMLVWDDRTSDELRKVGLMGTHDEETAQYFKNTKVQCVLCPRNPDVGRSIIQGLQTSTMFTHHQKAVVVDSDLPDIHGESQGGLQKRTIVSFIGGIDLCDGRYDTHEHPLFSTLNTIHKDDFHQPNFAGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKHFLTPLEDYDEIIVSPSEIKPLEDNETWTVQLFRSIDGGAVSGFPRTQDEAAEWGLVSGKNNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKATDLKVEDIGALHLIPKELSLKIVSKIKARERFVVYIVIPMWPEGDPESASVQAILDWQRRTMEMMYTEIAEAIEQVGSKALPTEYLTFFCLGNREVEKPGEYIPPERPVPDTNYDRAQKTRRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDTEIAMGAFQPHHLTEEENRPKGQIHGFRRALWLEHLGDVDALVLDHPEREECLKIVNFIAEENWKLYTKETFDEGNSIGFNHLLRYPIDITKSGQVIALEGFEFFPDTKACILGTKSDYLPPILTT 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0799 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Alju08g0799 826 Pfam Phospholipase D C terminal 744 816 IPR024632 -
Alju08g0799 826 PIRSF PLD_plant 1 826 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Alju08g0799 826 Gene3D C2 domain 6 211 IPR035892 -
Alju08g0799 826 SMART pld_4 667 694 IPR001736 GO:0003824
Alju08g0799 826 SMART pld_4 333 377 IPR001736 GO:0003824
Alju08g0799 826 Gene3D Endonuclease Chain A 215 455 - -
Alju08g0799 826 CDD C2_plant_PLD 4 157 - -
Alju08g0799 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 667 694 IPR001736 GO:0003824
Alju08g0799 826 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Alju08g0799 826 SUPERFAMILY Phospholipase D/nuclease 501 736 - -
Alju08g0799 826 Pfam Phospholipase D Active site motif 333 377 IPR001736 GO:0003824
Alju08g0799 826 Pfam Phospholipase D Active site motif 668 694 IPR001736 GO:0003824
Alju08g0799 826 SMART C2_3c 8 133 IPR000008 -
Alju08g0799 826 FunFam Phospholipase D delta 213 457 - -
Alju08g0799 826 Gene3D Endonuclease Chain A 486 714 - -
Alju08g0799 826 PANTHER PHOSPHOLIPASE D 4 814 IPR015679 -
Alju08g0799 826 FunFam Phospholipase D 480 713 - -
Alju08g0799 826 Pfam C2 domain 8 134 IPR000008 -
Alju08g0799 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 333 377 IPR001736 GO:0003824
Alju08g0799 826 SUPERFAMILY Phospholipase D/nuclease 167 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0799 Alju-ChrAlju08 6010400 6013840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0799 4 826 Phospholipase D Gene Family (Wang group) AT3G15730 63.189 0.0 1053