Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0778 ATGGTACTTTTACAGTACAAATGTCAAAGTGAAATATGCCATTTTGGTCCCACCACCCCCTTCCCTACGCCTCTTCTTCATCCTCCGCCCTCACTCTTGGCAGCCGCCGCCGTTAATCTTGCCTCACCGGCCTTCGCATTATCGCCTTCCTCTATTCGCCGTGAGGGTCCCTGTGGGCCCCCATCATCCTCTTCACAGCTACCAATGGGAAAGATGAAACCGGGTGAGGGAATAGTTAAAGATGTCAAAGGAAGAGCTGCATATTACAAACAAGACTGGGTTACCGGAACCTGTTCTGGCTTCAAGATATTGGGTCCAACTTTTTACATCTTTTTCGCTTCTGCTTTACCTGTCATCGCCTTCGGGGAGCAGCTTAATAGAGATACAGATGGAGCATTGAGCACGGTGGAAACATTATTTTCTACTGCTCTTTGTGGAATTATCCACTCGATATTTGGTGGCCAGCCTCTTCTGATTTTGGGGGTTGCTGAACCCACCGCTATAATGTACACTTATTTGTACCAGATCTGCCTAAAAAGGCCAGAACTAGGTGCCAATCTGTATCTGGCTTGGGCTGGTTGGGTTTGTGTTTGGACAGGAATCATTTTGATTCTTCTTGCAGTTTTTAACACGTGCACGATTATCAACAAATTTACAAGAATCGCAGGGGAGCTATTCGGCATGTTGATTACTGTGCTTTTCATTCAAGAGGCTGTTAAGGGACTTGTGGCCGAGTTCCAATTACCTAAGAACGAGAATCCATTGTCGGAGGAATTTCACTTCCAATGGCTGTTTACAAATGGCTTACTTGCTATTATTTTCTCTTTCGGGGTACTCCTCACTGCCCACAAAAGCAGAACTGCAAGATCATGGCGTTACGGAACAGGGTGGATGCGAGCTTTCATAGCAGATTATGGGGTTCCAGCCGTGGTCTTGCTTTGGTCTGCGCTATCTTATATGGTACCAGCCAAAGTCCCACAGGGTGTTCCCAGAAGGCTGGTTTGTCCCCTTCCTTGGGAAGCTGCGTCTCTGTACCACTGGACCGTAGTCAAGGACATGGCTAAGGTACCAGTGCTTTACATCTTTGCGGCTATTATTCCTGCCGTGATGGTGGCAGGTTTATACTTCTTCGATCACAATGTAGCTTCCCAGTTGGCTCAACAAAAGGAATTCAACCTTCAGAAACCAGATGCTTACCACCACGATATGCTCCTGCTTGGAATTATGACTTTGATTTGTGGTCTTCTTGGGCTTCCTCCATCAAATGGTGTCCTTCCACAGTCACCTATGCATACCAAGAGTTTGGCAGTTCTGAAGAGACAGTTGATGCGAAAGAGAGTTGTAAAAAAAGCCAAGGAATGCATTCAGGAAAAAAGGAGCAACTCTGAAATATACGGACAGATGCATGATGTGTTCATAGAAATGGATACAGCACCAACGAAACAAGAGTTGGCGACTTTGAAGGATGCTGTGATGAAACCTCATGAGAAAGACGGTGTAAAACAGAAATTTGATCCTGAGAAACACATTGATGCTTACTTGCCAGTACGTGTGAACGAGCAAAGATTAAGCAACTTTTTGCAGTCCTTCCTTGTGGGCGCATCCGTTTTTGCCATGCCTATTATTAGAATGATACCTACCTCAGTTCTATGGGGATATTTCGCTTATATGGCCATTGACAGTCTCCCAGGGAATCAGTTCTGGGAAAGGATATTGCTTCTCTTTGTCACCCCTAGAAGGCGTCACAAGATTTTGGAAGGTGATCATGCATCATTTGTGGAATCAGTGCCGTTCAAAACAATAGCTCTCTTCACAGTGATGCAGACTCTGTATTTTCTGTTCTGTTTCGGAGTGACATGGATACCTATTGGTGGAGTATTGTTTCCACTACCATTCTTCTTGCTGATAGTGATCAGGGAGCACGTGCTTCCCAGGATATTCAGCAATGGCGATCTCCAGGAACTGGATTCTTCCGAGTACGATGAAGTTGCCGGCGCGCCACCCATGGATCCCATTGAAGTCCCAGATGATGTAGCGGATGATAAATCAGACGATTTCTATGATGCCGAGTTATTGGATGAGATGACAACCCACAGAGGAGAGATGAAACATAGAATGAGTTTCACAATAAAGTATGGCATTCATGAGTGTATATGTAGTAGACAGTCAATTAAGGTTGAAGATCAGATCAATCATCTTCTGTGGAGTCTGGAAGGATTTGGTGGAGGAAGGAAAGGAATTGTTTGA 2247 0.4517 MVLLQYKCQSEICHFGPTTPFPTPLLHPPPSLLAAAAVNLASPAFALSPSSIRREGPCGPPSSSSQLPMGKMKPGEGIVKDVKGRAAYYKQDWVTGTCSGFKILGPTFYIFFASALPVIAFGEQLNRDTDGALSTVETLFSTALCGIIHSIFGGQPLLILGVAEPTAIMYTYLYQICLKRPELGANLYLAWAGWVCVWTGIILILLAVFNTCTIINKFTRIAGELFGMLITVLFIQEAVKGLVAEFQLPKNENPLSEEFHFQWLFTNGLLAIIFSFGVLLTAHKSRTARSWRYGTGWMRAFIADYGVPAVVLLWSALSYMVPAKVPQGVPRRLVCPLPWEAASLYHWTVVKDMAKVPVLYIFAAIIPAVMVAGLYFFDHNVASQLAQQKEFNLQKPDAYHHDMLLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLMRKRVVKKAKECIQEKRSNSEIYGQMHDVFIEMDTAPTKQELATLKDAVMKPHEKDGVKQKFDPEKHIDAYLPVRVNEQRLSNFLQSFLVGASVFAMPIIRMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPRRRHKILEGDHASFVESVPFKTIALFTVMQTLYFLFCFGVTWIPIGGVLFPLPFFLLIVIREHVLPRIFSNGDLQELDSSEYDEVAGAPPMDPIEVPDDVADDKSDDFYDAELLDEMTTHRGEMKHRMSFTIKYGIHECICSRQSIKVEDQINHLLWSLEGFGGGRKGIV 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0778 748 Gene3D Helical hairpin bin 85 127 - -
Alju08g0778 748 Pfam HCO3- transporter family 76 247 IPR011531 GO:0006820|GO:0016020
Alju08g0778 748 Pfam HCO3- transporter family 516 606 IPR011531 GO:0006820|GO:0016020
Alju08g0778 748 Pfam HCO3- transporter family 268 443 IPR011531 GO:0006820|GO:0016020
Alju08g0778 748 PANTHER ANION EXCHANGE PROTEIN 71 664 IPR003020 GO:0005452|GO:0006820|GO:0016020
Alju08g0778 748 MobiDBLite consensus disorder prediction 51 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0778 Alju-ChrAlju08 5857325 5863701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0778 74 705 Antiporters AT4G32510 66.102 0.0 891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2253 07 48465614 48469600 Alju08g0778 08 5857325 5863701 CCT
Alju08g0778 08 5857325 5863701 Alju08g0778 08 5857325 5863701 ECH
Alju08g0778 08 5857325 5863701 Alju11g0812 11 9676943 9682569 ECH
Alju08g0778 08 5857325 5863701 Alju07g2253 07 48465614 48469600 ECH