Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0765 ATGGTTTCCGGTCCGGAGCCTTTTGCTTTTTATTGCTTTCTCATTCTCTCTCTCTTTCATAAAAGGATTCTGATTCCCTTCGTTTATCTTTTCTGGAGATCGTGCTCTCTTCTATCGCTCTGCGTGTGGAACGGAAGCAAAAATGGAGGGCGAGAAGGTCGTGCTGCAGTCGTGCTGCTGGTAATGGCTCACCATAACAATGGCAACAACAGTTCGAGCCAACAGTTAGTTAAGACCGTCTTCCATGATTTTATGGGCGCGAAGCCCAATGATTCCCTTGTCGTTTTGCCCCCCAAAACCGCCACCGTGAGGCTATCCGAGGCCTCGCCGTCCTCCGCATCGATGTCCGTTGCCGCCTCGTCTGGCGGTGGCCGTGGTCCCTTCTCAACCACTTCCGACATCGGCTCTGAAAGACAGGTAGGAAATCATCTCGAGGGAGTTCCATTTTATGGACCTAGGAGTGATTTTTCTGACACTGGGCCAAGCAATAGACTAATAGGAAACAAGAGAGGCAGTTCTGAGTCCGCTTTCATGGGATCCTCCAGAGATGCCTTTCAAATGGTCCCTGACTCCATTCAAAACTCACATTTGATGAAAATCTTCCGGAGTACAGCGGGAGGAGATCATCATAGAAGATCTAATGATGATGAAGTTTTTCCTGGCATGCAGTCACTGAAGCCAACTTCAGCTTCTCAGATATTTCAGCCTCTTACTGGAACTAAGTTTGATGCCAATAGATGGGAACGGTCTGTCGTTATGAATGCTGGCCCCTCGATGCAGCATCCACCACGTGGGGCTCAATTAACACCTTTTGTGCACCAGATAGCTTCAAACAAGGTCAGGGAGACCAACATTGGTCCTTCATTTATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGCCCTGGAATTTTGAGCTCTATAAACATCACAACCTCTGCCACTGAGAAAACTCCATCTGCAGTGGTGCTTGGTGGAGGCAGGCCAAAGCCTATGATGAATGTAATAGATTTAGAATCATCCAATCCTCTTAGCCAACATGAGTTGAGATCTGCCAGCTGCCAGATGACCATATTCTATGGAGGTCAAGCTCACGTGTTTGATAATGTCCACCCCAATAAGGCAGATGTTATAATGAGCTTAGCAGGGTCAAATGGAGGAAGTTGGTCCACAAGCACTTGCTCGCCCAAGCCTCCATTAAAGCAGCTGCTTCATGATTCTGTAGAAACTCAAACAGGGAAGCTTCATGCCACTCCACCACCACCACTTGCAGGGCGACCTCAAGCAAGTGTTGCTGCCAAAGAAGATGGTAGAAGAAACCCAGTTGAAGTAGCCGAGCTAGGTCCCATTTCTCAAGAGAAGAGAGCCCAATGA 1386 0.4805 MVSGPEPFAFYCFLILSLFHKRILIPFVYLFWRSCSLLSLCVWNGSKNGGREGRAAVVLLVMAHHNNGNNSSSQQLVKTVFHDFMGAKPNDSLVVLPPKTATVRLSEASPSSASMSVAASSGGGRGPFSTTSDIGSERQVGNHLEGVPFYGPRSDFSDTGPSNRLIGNKRGSSESAFMGSSRDAFQMVPDSIQNSHLMKIFRSTAGGDHHRRSNDDEVFPGMQSLKPTSASQIFQPLTGTKFDANRWERSVVMNAGPSMQHPPRGAQLTPFVHQIASNKVRETNIGPSFISQSAADEGSRTGMKGPGILSSINITTSATEKTPSAVVLGGGRPKPMMNVIDLESSNPLSQHELRSASCQMTIFYGGQAHVFDNVHPNKADVIMSLAGSNGGSWSTSTCSPKPPLKQLLHDSVETQTGKLHATPPPPLAGRPQASVAAKEDGRRNPVEVAELGPISQEKRAQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0765 461 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 160 433 IPR040390 -
Alju08g0765 461 MobiDBLite consensus disorder prediction 114 136 - -
Alju08g0765 461 MobiDBLite consensus disorder prediction 414 461 - -
Alju08g0765 461 Pfam tify domain 356 387 IPR010399 -
Alju08g0765 461 SMART tify_2 353 388 IPR010399 -
Alju08g0765 461 ProSiteProfiles Tify domain profile. 353 388 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0765 Alju-ChrAlju08 5693709 5698949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0765 61 386 Tify Gene Family AT4G32570 37.572 2.58e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju08g0765 tify 1.9e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2267 07 48590592 48597367 Alju08g0765 08 5693709 5698949 CCT