Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0762 ATGAACAAGGAAAATACTGTTTATGCTGAAGGTGAAAATTTTCCAGTCCGAATCACTAGAGCAAGGGCCAGAGCCTTGGGATCATTGGGAGGAATACCTCCTTCCTCAAGGCCACCCTTTAAACAAGAACTGAAGTGTGCCCATCCAACAAAGTCCAAAAGAGCAGCGTCTGATGAGAACAAAGCTTCGGTCGTTACTGTGGATGGTCTTCAGAATAAGAGGAGGGCGGTGCTCAGAGATGCAACCAACATCTGCGAAAATTCATGTGAAAGAAGTATTGATGCTTCAAGGTTTCAGGCAAAAGGAGGTAAAAACACAAAGTCAGCTTCAGTTGTATCCACAGAAGTTTCATCAACACAAGATGTTAAAACAAAGTTAGCTGAAGAATTATCCAAAATAAGGGTGGTAGAATCACGTAACATCACTGACGCATTGAATTTAGAGGATAAAATGCCACCACAACGATGCATGTCCAATGATATAGGAGGTTGTCTTTCGGCAGACCCCATGCTTTCAACGCAGGATTCTGTGAAGTCTGATGAAATCCTGACCGCTCCAGATAAAGAAATAGAGAAACTAAGAGCCTCAGATGGCTTGGGCATTGTAGACATTGATTCAGAGTTAAAGGATTCTCAAGTTTGGAGTTTATATGCCTCGGATATATACAATAACATACGCGTCACAGAGCTTGAAAGAAGACCATCAACTGATTACATGGAGAATTTGCAGCAGGATATCAATCCAAACATGAGGGGAATTTTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTTGTTCCAGATACTCTTTACCTCACTGTAAATCTCATTGACCGGCTTCTCTCTATAAGTTTAACAACGAAACAAAAGCTTCAGCTTGTCGGTGTCGCTTGCATGCTAATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGACTTTTGCTTCATCACAGACAATACATACGCGAGAGATGAGGTATTGAAAATGGAGAGTGAGGTTTTAAATCTTCTGCATTTTCAATTATCTGTTCCCACCACCAAAACATTTCTAAGGAGATACATCCAAGTAGCACAATGTTCCTACGAGGTCCCCTGTGTTGAACTGGAATTCCTGGCAAATTATTTAACAGAGCTTACACTTGTTGAATACAGCTTCCTCAAGTTTCTACCTTCCCTTGTTGCTGCATCTGCTATTTTCCTTGCCAGATGGACGCTCAACCAGTCAGAACACCCATGGAACCCAACTCTAGAGCATTACACAAGTTACAGAGCCCCACAACTTAAAGCTAGTGTTCTTGCCCTGGAAGATTTACAGCTCAATACCAACGCATGTTCCCTGAACGCGATACGTGAAAAATATAGACTTCAGAAGTTCAAGCGCGTGGCAGCATTGTCTGCAAAACCGGTGCAACCTCTTTTCGAGACTTAA 1443 0.4213 MNKENTVYAEGENFPVRITRARARALGSLGGIPPSSRPPFKQELKCAHPTKSKRAASDENKASVVTVDGLQNKRRAVLRDATNICENSCERSIDASRFQAKGGKNTKSASVVSTEVSSTQDVKTKLAEELSKIRVVESRNITDALNLEDKMPPQRCMSNDIGGCLSADPMLSTQDSVKSDEILTAPDKEIEKLRASDGLGIVDIDSELKDSQVWSLYASDIYNNIRVTELERRPSTDYMENLQQDINPNMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRLLSISLTTKQKLQLVGVACMLIASKYEEICAPRVEDFCFITDNTYARDEVLKMESEVLNLLHFQLSVPTTKTFLRRYIQVAQCSYEVPCVELEFLANYLTELTLVEYSFLKFLPSLVAASAIFLARWTLNQSEHPWNPTLEHYTSYRAPQLKASVLALEDLQLNTNACSLNAIREKYRLQKFKRVAALSAKPVQPLFET 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0762 480 ProSitePatterns Cyclins signature. 251 282 IPR006671 -
Alju08g0762 480 Pfam Cyclin, C-terminal domain 349 470 IPR004367 -
Alju08g0762 480 Gene3D - 234 347 - -
Alju08g0762 480 SMART Cyclin_C_2 349 472 IPR004367 -
Alju08g0762 480 CDD CYCLIN_AtCycA-like_rpt2 349 463 - -
Alju08g0762 480 PIRSF Cyclin_A_B_D_E 36 477 IPR046965 GO:0016538|GO:0044772
Alju08g0762 480 FunFam Cyclin A1 336 468 - -
Alju08g0762 480 Gene3D - 220 468 - -
Alju08g0762 480 Pfam Cyclin, N-terminal domain 220 347 IPR006671 -
Alju08g0762 480 SMART cyclin_7 256 340 IPR013763 -
Alju08g0762 480 SMART cyclin_7 353 441 IPR013763 -
Alju08g0762 480 FunFam Mitotic cyclin 6 234 334 - -
Alju08g0762 480 CDD CYCLIN_AtCycA_like_rpt1 210 345 - -
Alju08g0762 480 SUPERFAMILY Cyclin-like 348 470 IPR036915 -
Alju08g0762 480 PANTHER CYCLINS 181 458 IPR039361 -
Alju08g0762 480 SUPERFAMILY Cyclin-like 210 346 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0762 Alju-ChrAlju08 5676872 5680097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0762 16 478 Core Cell Cycle Gene Families AT5G25380 53.533 2.24e-154 444