Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0759 ATGAACGTTCCCTCACTAAAACTATATCTTGAAGGTTTATACGACACTTGCCCATTGTCGATGGAGAATTCTGGGCCCTTGAACGGCACTCAGTTCGTTATTGACATAGCTGGAAGTAGTGAAGCTTCCACATCTACCTCTCCACATGATAGACATTTTAATGGCGGAGGTACATCACAACATGAAGACAGACCTACTAGTAGTGCAAGGTTACCAGCTTCTCTTCCTTCAGTTTCTGCTGCTTCTAGTGGTACAAATTCTAGGATTTCTTCAGTTGTAAGACGAGGGGACACCCGTCGGCATAGGAGTCCATTGAATTCAGGGTTATGGATATCTATTGAGCTAGTCCTCACAGTAAGCCAGATTGTTGCATCTATTATTGTTTTGTCTTTGTCAAGGCATGAGCATCCACGCACTCCACTGTTTGCATGGATTGTTGGTTATGCATCTGGATGCGTTGCTACTATCCCCTTGCTTGGTTGGAGGTATTATCATCATAACCCGAGTAGAGAGCGAAATTCATCTCAACCACGTCAAGCTTCCCCTCGAGTTAATGTTTCTTCGAGGACACTTTCTGTTTCAAGAAATAATGGGGGAGAAGACAATCAGGCTGTTGTTTCATCCTCTAGAAGCAGTCAAGTTTCATTAATGATGAATCCAAGACTAAAGTCGCTAGTGGAATATTTCAAAATGGCCTTAGATTGCTTTTTTGCTGTATGGTTCGTTGTTGGCAATGTGTGGATCTTTGGTGGAAACTCGTCTGCTGGTGATGCTCCTAATATGTATAGGTTATGTATTGTGTTTCTGACATTCAGCTGTATTGGCTATGCTATGCCCTTCATTTTATGTGCAACAATCTGCTGTTGTCTGCCTTGTATAATTTCCATTCTTGGGGTTAGAGAGGATCTGGCACAAGCAAGAGGGGCAACCTCTGAATCTATCAGTGCCCTGCCAACGTACAAGTTCAAGGTGAAGAAACGTAAAAACAGCAATAAAAACAGTGATGAAAGCAACTCAAATGTTTTTGAAGGTGGAGTTGTCGCTGCTGGAACTGAAAAGGAGCGTGTGATCTCTGGAGAAGACGCAGTTTGCTGCATCTGCCTGGCAAAGTATGAAAATAACGATGAGCTGAGAGAGTTGCAATGCTCGCATCTTTTTCACAAAGACTGTGTAGACAAGTGGCTCAAGATTAATGCATCATGCCCTCTTTGCAAAAGTGATGTTGGTGGGAACCTAATAGGATCAGTCTCTGGTGAAGGTTCCAACCAACAAAGGGGTGAGAGCAGAGTTGGAGTTAGCCCGATCAATAGCATAGTATAA 1320 0.4311 MNVPSLKLYLEGLYDTCPLSMENSGPLNGTQFVIDIAGSSEASTSTSPHDRHFNGGGTSQHEDRPTSSARLPASLPSVSAASSGTNSRISSVVRRGDTRRHRSPLNSGLWISIELVLTVSQIVASIIVLSLSRHEHPRTPLFAWIVGYASGCVATIPLLGWRYYHHNPSRERNSSQPRQASPRVNVSSRTLSVSRNNGGEDNQAVVSSSRSSQVSLMMNPRLKSLVEYFKMALDCFFAVWFVVGNVWIFGGNSSAGDAPNMYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDLAQARGATSESISALPTYKFKVKKRKNSNKNSDESNSNVFEGGVVAAGTEKERVISGEDAVCCICLAKYENNDELRELQCSHLFHKDCVDKWLKINASCPLCKSDVGGNLIGSVSGEGSNQQRGESRVGVSPINSIV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0759 439 SMART ring_2 364 404 IPR001841 -
Alju08g0759 439 ProSiteProfiles Zinc finger RING-type profile. 364 405 IPR001841 -
Alju08g0759 439 Pfam Ring finger domain 364 405 IPR001841 -
Alju08g0759 439 SUPERFAMILY RING/U-box 356 408 - -
Alju08g0759 439 MobiDBLite consensus disorder prediction 40 103 - -
Alju08g0759 439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 347 410 IPR013083 -
Alju08g0759 439 MobiDBLite consensus disorder prediction 417 439 - -
Alju08g0759 439 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 29 408 - -
Alju08g0759 439 FunFam E3 ubiquitin-protein ligase 347 412 - -
Alju08g0759 439 CDD RING-H2_EL5-like 364 404 - -
Alju08g0759 439 MobiDBLite consensus disorder prediction 40 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0759 Alju-ChrAlju08 5657923 5666304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0759 94 409 C3H Transcription Factor Family AT1G80400 58.696 1.71e-138 401