Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0752 ATGCAAAGTAGAGCTGAAGCTCTTCAGAATGTCGAGTCCACTATTCATGAGCTAAGCAACATTTTCAACCAATTGGCAACACTTGTTTCCCAACAAGGAGAGATTGCTGTCAGGATTGACGAGAATATGGATGATACATTGGCAAACGTAGAGGGAGCACAGGGGGCTTTATTAAAGTATCTGAACAGCATATCTTCCAATAGGTGGTTAATGATCAAGATATTTTTTGTACTAATATTTTTCCTTATGGTATTCCTATTTTTTGTGGCATAG 273 0.381 MQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAVRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0752 90 Pfam SNARE domain 38 86 IPR000727 -
Alju08g0752 90 SMART tSNARE_6 1 60 IPR000727 -
Alju08g0752 90 PANTHER SYNTAXIN 1 83 IPR045242 -
Alju08g0752 90 CDD SNARE_syntaxin5 1 79 - -
Alju08g0752 90 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 1 60 IPR000727 -
Alju08g0752 90 SUPERFAMILY t-snare proteins 1 53 IPR010989 GO:0016020|GO:0016192
Alju08g0752 90 Gene3D - 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0752 Alju-ChrAlju08 5604716 5605946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0752 1 90 SNARE and Associated Proteins AT3G24350 82.222 1.14e-48 155