Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0726 ATGGAGTTTCCCACCTCCTCTGCCGGGATCGCTCAGCAAACCTGGGAGCTTGAGAACAATATCGTCCCCATGGACTCTCCTACTACCAGCGCCGACCAAGGCTCCGACGCCATCTTCTACTACGACGAGGCCGCCCAGACCGAATTCCAGAGAAGCAAGCCTTGGGTTAACGACCCCCACTACTTCAAGCGCGTTAAGATCTCCGCCCTCGCCCTTCTCAAGATGGTTGTCCATGCTCGCTCTGGTGGCACTATCGAAGTCATGGGTCTCATGCAGGGCAAGACCGACGGCGATGCCATCATCGTCATGGACGCCTTCGCTTTGCCCGTTGAAGGCACCGAGACTCGTGTCAATGCGCAGGCCGATGCCTACGAGTATATGGTTGATTATTCTCAGACTAATAAGCAGGCCGGGCGTCTGGAAAACGTTGTTGGATGGTACCATTCCCACCCTGGTTATGGATGTTGGCTTTCTGGCATTGACGTGTCTACGCAAATGCTAAATCAGCAATTTCAAGAGCCCTTTTTGGCTGTAGTCATTGACCCAACTAGGACGATTTCTGCTGGAAAAGTTGATATTGGAGCTTTCAGGACATACCCAGAAGGTTATAAGCCTCCAGATGAACCTGTCTCTGAGTATCAAACGATCCCGTTAAATAAGATTGAAGACTTTGGTGTTCACTGTAAACAGTACTATGCGTTGGATATCACTTACTTTAAGTCTTCTCTTGATTCACATCTCTTGGATCTTCTTTGGAACAAATATTGGGTGAATACACTTTCATCTTCTCCATTATTGGGTAATGGAGACTATGTCGCTGGACAAATATCAGATCTAGCTGAAAAGCTAGAACAAGCAGAAAATCAGTTGGCACACCCACGCTTTGGGTCAATAATAGGTCCTCCTCAAAAAAAGAAAGGAGAAGAGTCTCCCCTTGCTAAGATTACTCGTGACAGTGCAAAAATTACTGTGGAGCAAGTACATGGTTTGATGTCGCAGGTCATCAAGGACACCCTCTTCAACTCTGTTCGTCAAGCAACCAATTCCGTTGCTGAAGCATCTGACCCTGAACCAATGATTGAAAGCTGA 1089 0.4775 MEFPTSSAGIAQQTWELENNIVPMDSPTTSADQGSDAIFYYDEAAQTEFQRSKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTISAGKVDIGAFRTYPEGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHPRFGSIIGPPQKKKGEESPLAKITRDSAKITVEQVHGLMSQVIKDTLFNSVRQATNSVAEASDPEPMIES 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0726 362 SUPERFAMILY JAB1/MPN domain 64 201 - -
Alju08g0726 362 Gene3D Cytidine Deaminase, domain 2 4 267 - -
Alju08g0726 362 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 62 173 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju08g0726 362 FunFam COP9 signalosome complex subunit 5 5 267 - -
Alju08g0726 362 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 56 353 - -
Alju08g0726 362 SMART pad1_6 64 201 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju08g0726 362 ProSiteProfiles MPN domain profile. 65 202 IPR037518 -
Alju08g0726 362 Pfam Cop9 signalosome subunit 5 C-terminal domain 261 341 IPR040961 -
Alju08g0726 362 CDD MPN_RPN11_CSN5 54 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0726 Alju-ChrAlju08 5426323 5430319 Dispersed/Wgd