Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0713 ATGACGCATGTTTTCCTTTACGTCAAAGCAAGCATTCTTGTATACGACTTGAGTTCGTCCACAATGGAGCTAAAAAATGAGAAGCTAGTTAGGTTTTATGATGATGGTAAACAGAAACTAGAGCTTTCTTTGGAAAATCCATTGTCAGTATACAAGGTACACTCAGCCGTAAACTCTGAAGGGAAACTTGTGAGCTGTGATAAGAACAAAATTAACCTCAAAATTCCTTCTCTTGGAAAGTTCAAGGTATTCGCAGAAAACCATAAACCATGGAAGAAGAGAATCCTTGATCCTGGAAGTGACATATATTTGCAGTGGAACAGGGTCTTCCTCTGTTTTTGCATTGTGTCTCTATTTGCTGACCCACTGTTTTTCTACCTGCCTTCGGTGGCAAATGATGAAAAGTCAGCGTGTATGGCTACTGATTTGAGTATTGGAATTGTAGTTACATGTTTCCGAACATTGGCTGATATTTTCTATCTGCTGAACATGCTCATAAAGTTCAGAACAGCTTATGTATCACCAAGTTCAAGGATTTTTGGAAGGGGTGAGTTAGTCATGGATCCAAGGTTGATTGCAAAACGGTATTTAAGGTCAAAGTTCTTCATAGATCTTATAGCTACACTACCTCTTCCTCAGATCATGATTTGGTTTATTATGCCTGCAATTAGAAGCTCTCATGCTGATCACACCAATAATGCTCTTGTACTGATTGTTCTGCTTCAATATGTTCCCAGATTATATTTGATTTTCCCCTTAAGTTCTCAGATTATCAAAGCCACTGGTGTAGTCACAAAGACAGCTTGGGCTGGAGCTGCTTATAATCTTTTACTCTACATGTTGGCTAGCCATGTGTTGGGGGCATCATGGTACTTGTTGTCAATTGAAAGGAATGCTACATGTTGGAAATCACATTGCAAGAATGAAACTTCCCCCATGAAATGTGTTCTTCAATACTTGGATTGCAGCAGTTTAAACAATGGTGATCGCATGAAGTGGGTACAAACTACTTCTGTGTTTGGTAACTGCAATCCAAATAATGACATCAGTTTCAAGTATGGCATTTTTGGACCTGCAGTTGAAAACAATGTTGTTTCCTCACAGTTTTTAGAGAAGTATCTCTATTGTCTATGGTGGGGCTTGCAAAACTTGAGTTCGTATGGCCAGACTTTGAGTACAAGCACATTCATTGGGGAAACTACATTTGCCATACTTATAGCTATCCTGGGTCTAGTTTTGTTTGCCCACTTAATCGGGAACATGCAGACATATCTGCAATCTATCACTGTGAGGCTTGAGGAATGGAGGCTCAAACGACGTGATACTGAAGAATGGATGAAACACCGTCAACTCCCACAAAATCTGAGAGAACGCGTTCGAAGATTTGTTCAATACAAGTGGCTCGCAACTCGAGGAGTTGATGAAGAAGCTATCTTGCGAGGCCTACCCATAGATTTGCGTAGAGACATCCAACGCCACCTTTGCTTAGACCTTGTTCGACGTGTCCCTTTTTTCTCGCAAATGGATGATCTGTTACTTGATGCAATATGTGAGAGATTGGTTTCATCCTTGAGTACTCAAGGCACTTACATTGTCCGAGAAGGCGATCCAGTCACCGAGATGCTTTTCATCATAAGAGGAAGACTTGAAAGCTCAACTACAAATGGAGGCAGAACAGGTTTCTTCAACTCAATTACATTAAGACCTGGTGATTTCTGTGGAGAAGAGCTACTAGCATGGGCTTTACTTCCAAAATCTACTTCCAATTTGCCTTCTTCTACTAGAACAGTGAAAGCCCTCGGAGAAGTGGAAGCCTTTGCACTAAGAGCTGAGGATCTTAAGTTTGTTGCGAATCAGTTTCGCCGTCTTCACAGCAAGAAGCTGCAACATACCTTCCGTTTCTACTCTCACCATTGGAGGACATGGGCAGCCTGCTTCATTCAAGCTGCTTGGAGAAGGTTCAAGAAGAGGAAGCTCGCGGCGAGCCTTACTTTGAATGAATGCCAATCATTTACTTATGATGAACACATTAATGATGTAATGAGACATGAAGAGGAGGAGCAGCCTAGTGCTGTGAGTTCAAGTGCAAATTCATTAAGTGTCACTATACTTGCTTCAAGATTTGCTGCAAACACAAGGAGAGGAGCTCAGAGGATCAAGGATCTTGAGATGCCTAAGTTGCAGAAGCCTGAAGATCCAGGCTTCTCGGTGGAAGCAGAGGATGATTAG 2229 0.4159 MTHVFLYVKASILVYDLSSSTMELKNEKLVRFYDDGKQKLELSLENPLSVYKVHSAVNSEGKLVSCDKNKINLKIPSLGKFKVFAENHKPWKKRILDPGSDIYLQWNRVFLCFCIVSLFADPLFFYLPSVANDEKSACMATDLSIGIVVTCFRTLADIFYLLNMLIKFRTAYVSPSSRIFGRGELVMDPRLIAKRYLRSKFFIDLIATLPLPQIMIWFIMPAIRSSHADHTNNALVLIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERNATCWKSHCKNETSPMKCVLQYLDCSSLNNGDRMKWVQTTSVFGNCNPNNDISFKYGIFGPAVENNVVSSQFLEKYLYCLWWGLQNLSSYGQTLSTSTFIGETTFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMKHRQLPQNLRERVRRFVQYKWLATRGVDEEAILRGLPIDLRRDIQRHLCLDLVRRVPFFSQMDDLLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTSNLPSSTRTVKALGEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRFKKRKLAASLTLNECQSFTYDEHINDVMRHEEEEQPSAVSSSANSLSVTILASRFAANTRRGAQRIKDLEMPKLQKPEDPGFSVEAEDD 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0713 742 Pfam Ion transport protein 106 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju08g0713 742 CDD CAP_ED 504 635 IPR000595 -
Alju08g0713 742 SMART cnmp_10 504 635 IPR000595 -
Alju08g0713 742 Gene3D Jelly Rolls 502 622 IPR014710 -
Alju08g0713 742 ProSiteProfiles cAMP/cGMP binding motif profile. 504 588 IPR000595 -
Alju08g0713 742 FunFam Cyclic nucleotide-gated ion channel 1 502 620 - -
Alju08g0713 742 SUPERFAMILY Voltage-gated potassium channels 98 426 - -
Alju08g0713 742 FunFam Cyclic nucleotide-gated ion channel 1 431 495 - -
Alju08g0713 742 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 85 733 - -
Alju08g0713 742 Gene3D Helix hairpin bin 432 495 - -
Alju08g0713 742 Pfam Cyclic nucleotide-binding domain 527 615 IPR000595 -
Alju08g0713 742 SUPERFAMILY cAMP-binding domain-like 434 626 IPR018490 -
Alju08g0713 742 Gene3D - 107 430 - -
Alju08g0713 742 MobiDBLite consensus disorder prediction 719 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0713 Alju-ChrAlju08 5309980 5315412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0713 31 738 Ion Channels AT2G24610 70.515 0.0 1042