Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0712 ATGAAGCTCAAAAAAGACAAGTCACTAGGGTTTTCCATCTACGGTGAACAGAACCAAGAGCGTTCCAAGTTAAAGGCAACAATAAACCCGGAAGGCCAAACCAGGATTGATGATAACTACAGAGTCAAACGAAAAATTCATTCACCTGTAAAGCATATGATATTCCCAGAAAAACATGAACAGAGGAAGAAGGTGATGATGATGATTTTTGATCCTGGAAGTGAAGCATATTTGAGGTGGAACCGAGTTTTCCTCGGTTTTTGCTTACTAGCCCTCTTTATTGATCCTCTGTTTTTCTACGTGCCCATATCTGAAAATGATGGACTCTCATCATGTATGACTACTGATTCGAGTTTGGCAATTGTTCTGACGTGTCTCCGTACATTATCTGATATTTTCTATCTGCTCAACATGCTCATCAAGTTCAGAACAGCTTATGTGCACCCAAATTCAAGGGTTTTTGGCAGAGGTGAGCTAGTTATGGATCCATGGTTGATTGCCAAGAGGTATTTGAGATCAGAATTCATCATAGATATTGTAGCCACACCGCCCCTTCCTCAGATCCTGATTTGGGTTATTAGAAGTTCCCGTGGAGATCAGCCCAGAGATACTCTTGTACTGATCATTCTGCTTCAATATTTTCCCAGATTATATTTGATTTTCCCATTAAGGTCTCAGATTATCAAAGCGGCTGGTATTGTTACAAAGACAGCTTGGGCAGGAGCTGCTTATAATCTTTTACTTTACATGTTGGCTAGCCATGTGTTGGGAGCATTATGGTATTTGTTTTCGTTTGAAAGGAATGTTACTTGTTGGAACTCTGAATGCAAAAGTGAAAGTCAATGTGCTCTCAAGTATTTGAATTGCAGAACTTCAAACGATGATGATCGCATAAAGTGGGTCAACTCTACTGCTGTGTTTAGCAGCTGCAATCCATCAAACGGCAACGGTTTCGAATTCGGCATTTTTGAACCAGCAGTTAACTATAACGTTAGTTCATTACAGTTTGTTCATAAGTATGTCTATTGTCTGTGGTGGGGCTTGCAGAACTTGAGTTGCTATGGCCAAAATTTGATTACAACTAAGTTCATTGGGGAAACTACATTTTCAATACTCGTATGTACCCTTGGTTTAGTATTGTTTGCCCACTTGATTGGAAACATGCAGAAATATTTGCAATCCATTACTGTAAAAGTTGAGGAATGGAGACTCAAGCGACGTGATACTGAAGAATGGATGGAACATCGCCAACTTCCACAACATTTGAGAGAACGTGTTCGAAGATTTCTTCAATACAAGTGGCTTGCAACTCAAGGAACCAGTGAGGAATCTATCTTGCGAGGCCTTCCCAAAGACCTACGTAGACATATTCAATGTTACCTTTGCTTAGATCTTATTCGACGTGTCCCGTATTTCTCACAAATGGATGATCAGCTACAGGAAGCAATATGTGAGAGATCGGTATTGTTCTTGAGTCCTCAAGGCAGTTATGTTGTCCGAGAAGGAGATCCAGTCACAGAGATGCTTTTCATAATAAGAGGAAAACTTGAAAGCTCAACCACAAATGGAGGAAGGACAGGTTTCTTCAACTCTAATGTAATGAAACCAGGTGATTTCTGTGGAGGAGAGTTACTATCATGGGCATTGCTTCCAACAACAACCACTCTCAATTTGCCTTCTTCTACAAGAACAGTGAAAGCCCTTGTGCAAGTAGAGGCCTTTGCACTGAAAGCTGAAGATCTCAAGTTTGTGGCGAATCAGTTTCGTCATTTTCACAGCAAGAAGCTTCAGCATACCTTCCGATTCTACTCGTCCCATTGGAGGACATGGGCAGCCTGCTTCATTCAGGCTTCTTGGAGAAGGTACAAGAACAGAATGGTGGCAATGAGTTTGAGGAAAGATCAATCATTTGATTTTGATGAAATGGGACATAGCCAGCAAGTTCTTAGTTTTGTGACTTCAAGTGATAGTTCACTGAGTGAACCTATAGCCATATCAAGGAGAGGAGCTCTGAGGATGATGGATATTGAGATGCCTAAGTTACAAAAGCCTAAAGAGCCAGACTTCTCAAAGGATGCAGAGGACATTTAG 2091 0.4094 MKLKKDKSLGFSIYGEQNQERSKLKATINPEGQTRIDDNYRVKRKIHSPVKHMIFPEKHEQRKKVMMMIFDPGSEAYLRWNRVFLGFCLLALFIDPLFFYVPISENDGLSSCMTTDSSLAIVLTCLRTLSDIFYLLNMLIKFRTAYVHPNSRVFGRGELVMDPWLIAKRYLRSEFIIDIVATPPLPQILIWVIRSSRGDQPRDTLVLIILLQYFPRLYLIFPLRSQIIKAAGIVTKTAWAGAAYNLLLYMLASHVLGALWYLFSFERNVTCWNSECKSESQCALKYLNCRTSNDDDRIKWVNSTAVFSSCNPSNGNGFEFGIFEPAVNYNVSSLQFVHKYVYCLWWGLQNLSCYGQNLITTKFIGETTFSILVCTLGLVLFAHLIGNMQKYLQSITVKVEEWRLKRRDTEEWMEHRQLPQHLRERVRRFLQYKWLATQGTSEESILRGLPKDLRRHIQCYLCLDLIRRVPYFSQMDDQLQEAICERSVLFLSPQGSYVVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSNVMKPGDFCGGELLSWALLPTTTTLNLPSSTRTVKALVQVEAFALKAEDLKFVANQFRHFHSKKLQHTFRFYSSHWRTWAACFIQASWRRYKNRMVAMSLRKDQSFDFDEMGHSQQVLSFVTSSDSSLSEPIAISRRGALRMMDIEMPKLQKPKEPDFSKDAEDI 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0712 696 MobiDBLite consensus disorder prediction 677 696 - -
Alju08g0712 696 CDD CAP_ED 472 603 IPR000595 -
Alju08g0712 696 SMART cnmp_10 471 603 IPR000595 -
Alju08g0712 696 ProSiteProfiles cAMP/cGMP binding motif profile. 471 541 IPR000595 -
Alju08g0712 696 Gene3D Jelly Rolls 469 590 IPR014710 -
Alju08g0712 696 Gene3D Helix hairpin bin 396 462 - -
Alju08g0712 696 Pfam Ion transport protein 80 399 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju08g0712 696 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 689 - -
Alju08g0712 696 Gene3D - 107 395 - -
Alju08g0712 696 Pfam Cyclic nucleotide-binding domain 494 582 IPR000595 -
Alju08g0712 696 MobiDBLite consensus disorder prediction 678 696 - -
Alju08g0712 696 SUPERFAMILY Voltage-gated potassium channels 74 393 - -
Alju08g0712 696 SUPERFAMILY cAMP-binding domain-like 400 595 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0712 Alju-ChrAlju08 5305861 5308885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0712 14 692 Ion Channels AT2G24610 59.110 0.0 828