Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0698 ATGGGGATAGCAGAAGCATGCTCCAGGATCATTGGAGACTTTTTACAAGCTTTAAGAGGTTCACAAGAAAGCTCAAAGACTCAAGTAATTGATCACAATGATCCTCCCTGCAAGCCCCAGAATGTGATCAAACTTGATGACAAGATGGTCAGTGCTCTAATCACTGTGTTTGGCATGGAAAACAATGGAAGAATCAAGAAGGAAAACGCAAGGCAAGTGGTAGAGAAGCTGGGTTTGCTGTATGGTTCAGAGGAAGATAAGTCCTCAGGGTTTGAACTTGCTAGTAAAGCAGGAGGCTTGGAAGATGAAGAGGTTCCAGTAGAAGAAGTGCTCGATGGATTGGAGGATATGTCGAAGCGCAGCGAGCTGTTACACGAGGCCTTCAAAATCTTCGACGAAGATGGAGATGGATACATAGATGCAATGGAGTTGAAGAGGGTTCTGGATTGCTTGGGGTTGGATAAAGGTTGGGACATGAGTGCCATTGAGAAAATGGTGAATGTTGTAGATTTGAACTTTGATGGTAAGGTTGATTTCACTGAGTTTGAGTTGATGATGGGGTAG 564 0.4397 MGIAEACSRIIGDFLQALRGSQESSKTQVIDHNDPPCKPQNVIKLDDKMVSALITVFGMENNGRIKKENARQVVEKLGLLYGSEEDKSSGFELASKAGGLEDEEVPVEEVLDGLEDMSKRSELLHEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMSAIEKMVNVVDLNFDGKVDFTEFELMMG 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0698 187 CDD EFh 124 182 IPR002048 GO:0005509
Alju08g0698 187 ProSiteProfiles EF-hand calcium-binding domain profile. 157 187 IPR002048 GO:0005509
Alju08g0698 187 SMART efh_1 123 151 IPR002048 GO:0005509
Alju08g0698 187 ProSiteProfiles EF-hand calcium-binding domain profile. 119 154 IPR002048 GO:0005509
Alju08g0698 187 FunFam Calmodulin A 109 187 - -
Alju08g0698 187 PANTHER CALCIUM BINDING PROTEIN 118 186 - -
Alju08g0698 187 SUPERFAMILY EF-hand 42 186 IPR011992 -
Alju08g0698 187 Pfam EF-hand domain pair 123 186 IPR002048 GO:0005509
Alju08g0698 187 Gene3D - 13 187 - -
Alju08g0698 187 ProSitePatterns EF-hand calcium-binding domain. 132 144 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0698 Alju-ChrAlju08 5214255 5214818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0698 53 186 EF-hand Containing Proteins AT5G44460 39.583 3.85e-18 76.3