Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0694 ATGATTGGCTCGTCCTCATGTTGCTTGTTAAGTGTTACACGTTGGCTCAGAATTTCATGTGGATTCTTCATCTTTGACGAGGTCACGATGGTCATTTTGATCAGATCATTTGAGTTGCTGTACATCTTGAGACTAGTATTAATGTCAGGATTTTATACAGCTGGTATGAATATTTGCAACTTGAAGTATACGCATGATGATGATGTGTTAAGTTGTTATTGTGTGCATGTGTGTGTGGGGTTACAGAAGGAGAAGGAATCAAGCTGTAGGGAGATGGAGATGTGTGGAGGGAAAGAGGAAACCCTACCACCAGGATTTAGATTCCATCCTTCAGATGAAGAGCTTATCACTTACTATCTCATCAACAAGATCTCTGATTCTAGCTTCACTGGAAGAGCTATTGCTGATGTTGATCTCAACAAATGCGAGCCTTGGGACCTCCCTGGGAAGGCGAAGATGGGAGAGAAAGAATGGTACTTCTTCAGCCTGAGAGATCGCAAGTACCCAACTGGAGTGAGAACGAATCGAGCAACCAACACAGGCTACTGGAAAACCACCGGCAAAGACAAGGAAATCATCAACACCGCCACGTCGGAGCTCGTCGGCATGAAGAAGACTTTGGTTTTCTACAAAGGCAGAGCCCCTAGAGGCGAGAAAACTAACTGGGTCATGCACGAATACCGCATCCACTCTAAATACAACAAGCAAGATGAATGGGTGGTATGCCGAGTGTTTCAGAAGAGTGGGACTAGTGTGGTAAAGAAGTTCCCTTCCAACCATACAAGAGGATCTCTGAATCCATATGTCCTGGACATAGCAAATTTTACTGTTGGTACTGGTATCAATATGCCACAACCCATGAATCTGATGCAGCTTGCAGATCCAGCCGCTCATTTTCCTTACGGAAGGAATATTAATAATAATAATGGTTACATGATGAATCATTCTGTGCCAAGCAATACTACTACTTCTCTGAACCTACCAATGCAACAATCTCATTTCAACTATCCAGTTACAGCTTCAGGAGGGTTCAGTATCTCAGGACTAAATTTGAATCTGGGAAATGCGTCATCAGTTGCAGTAGGTGATGGAGCAACACCTACGTCATCATCACAACCCTTTTCGCGACCATTCAGTAACCAACATGATTTTGTGAGTGCTAACAACGTTGTCACACCTGTCACTTCTCTCGTTGCAGACAACCTAGGAGGCTATGGTGTGGATATCAGCAACGTCATCAATCCTCAGAACCAGATCAGTAGTAATAGGTTTATGGGCATGGCGGATCACTGTGTGGACCTCGATGCTTACTGGCCTTCCTACTGA 1326 0.4412 MIGSSSCCLLSVTRWLRISCGFFIFDEVTMVILIRSFELLYILRLVLMSGFYTAGMNICNLKYTHDDDVLSCYCVHVCVGLQKEKESSCREMEMCGGKEETLPPGFRFHPSDEELITYYLINKISDSSFTGRAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIINTATSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKYNKQDEWVVCRVFQKSGTSVVKKFPSNHTRGSLNPYVLDIANFTVGTGINMPQPMNLMQLADPAAHFPYGRNINNNNGYMMNHSVPSNTTTSLNLPMQQSHFNYPVTASGGFSISGLNLNLGNASSVAVGDGATPTSSSQPFSRPFSNQHDFVSANNVVTPVTSLVADNLGGYGVDISNVINPQNQISSNRFMGMADHCVDLDAYWPSY 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0694 441 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 99 319 - -
Alju08g0694 441 FunFam NAC domain-containing protein 100-like 111 251 - -
Alju08g0694 441 ProSiteProfiles NAC domain profile. 102 247 IPR003441 GO:0003677|GO:0006355
Alju08g0694 441 SUPERFAMILY NAC domain 94 247 IPR036093 GO:0003677|GO:0006355
Alju08g0694 441 Pfam No apical meristem (NAM) protein 103 229 IPR003441 GO:0003677|GO:0006355
Alju08g0694 441 Gene3D NAC domain 111 251 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0694 Alju-ChrAlju08 5175630 5178128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0694 98 441 NAC Transcription Factor Family AT2G24430 49.162 1.09e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju08g0694 NAM 1.3e-40 No_clan