Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0665 ATGTCTTCCTCGGAGTCTCCCAGGGCAGATTCCCGATCAGCTCACCGGCAGCCCTATCAGGCCACATTTTCGACATTAACGTTGGATTTGAAAGCGAAATGGCCAATTGGTGTTGATAGTTGCCTACCATTGTTGATGGAGCAGAGTGAAACCATTTCTGATTCAGCACCACGGAAATTTGTTCGGCAATTGGATTTCACGGCCATCGGCGTAGATTCAGTGAACGTAGAATTGCCGCGGGCACCTGAATCTCTGACTCATTTAGAACTACTACCGCAGACGCAGAAACCACTGCCACAAGCGATTTTGCGGCCACAATCACTATTGCCGTCTCAAATACAAATTGAACCGAAGTTGCAGTCGCAGGCATACTCACCGACACAATCAAAGTTACCTCTACGGTCGCCGGGGCAGCAGCTATGGTCATCTTCACACACACAACAACAGCGACCACCGCAATCTCAGGTCAACCAGCAATCGAAACCGCGGCCGCAGCTAGTTTCACCTGCTCGTCGAATTCCGCACCCTGTGCAGAAAATTTCGATGACGACGTTACCATTACTGAAGCAAGAGTCTCCCAGTAAACGACCTTGGCATAATGTGGGATCAAAAGACAGCACTCCAAAGAAACAAAAGCAGTGCAACTGCAAGAATTCTCGGTGCCTCAAATTGTACTGTGAGTGTTTTGCTGCTGGTATACACTGTGATGGCTGCAACTGTTTAAATTGTCATAATAATGTGGATAATGAGGCCGCCAGACAAGAGGCAGTTGGAATAATTTTAGAGCGCAATCCAAATGCGTTCAGACCAAAAATTGCAAGCAGTCCACAAGAACCACGGGGTTCTAAGGAAGAGGCTGAAATTCAAGTATTAGGGAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGTTTCCAAGCCAATGTCCTCTGCTCTGAAAACTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGAAGAAAGAATTGCTCTTGATCCAATGAACCTCAAACAGGCAGCTAATGCTGCCATCAGTCAAGCAATTGGGTACTCTAGCTATGGGATGGACATAACACCCAAGAGAAGAAAACTTAAGGAAATAATTTCTGGCAAAGCTATCACAGATCAAGCTGTTTTGACAGCTCAATTCCAACAGGAAAATGATCTAGTGGTTGCGACAACTGGTCCGTCTGCGTCTGTTGCCTCTGACATTGCCAATGTAACAATTCCAGGGTCTGCAAGATCAACATACAGGTCCCCATTGGCGGATGCTCTCCAGCCACAGGATGTGAAGTATCTCTGTTCACTTTTTGTTGTTCTATCAGGATTAGCCGCAGAGTCATATGCAGAGTCAAGAGGCAGGGTAGACCAGCAAATGGGGATGAAAAAATCTGAAACTTCTGTTGCTTCATCAGCTGAATTACTGCAAGACAACAATAAAAAAGTCCACAAGCCTGTTGTTGATGGTCATGCAAAGAAAAATGGAGCAGAGAGAAGTGGAACTAGTGATTCTGGATCAGAAGGAGATGATATGCAGAACTACGGGAGGCCATTGTCACCGGGAACGCTAGCATTGATGTGTGATGAACAAGATGAGATGTTTCTTTCTGATAGTGCTGCCAATGCTGTGGCTTGCGATGATCAAAAAATGATTCATAAGTCATCAAATTCTGATGTTTACGTGGACATTTATGGAGAGCAGGAACGGCTTGTGCTCACCCGGTTTTGGGACGTTCTCCGTGGACTCATCACTCACGGAAGCATAAGAGAAGCGATGTGCTCCCCATCAGCCAATAAAGAGGTGGGAAGCAAACAAGAAGCAGTTGATAATAGCAATAATGGAGCTGAAACTGATTTAAGTGAGAAGGGGAAGGGAGTTCACATACACAGCAATCGCATAGCAAATTCCCACATCCCATTAGCCACTAAAGTATCTGAAACAAGTAGTGCAATGCCTAATGGACCAGACAATGATGACCTATCATTGAGGATCGGTCTGCCTACTGGAATTGCTGGGAATATGCTAGCATCCATAACTGGAATATCTTCTTTCCTAGCATCCTTGTCTGAATCCAAGCCTCGGTCAACTTGTATTAGTAACCTTATCCTAAAACTCCTGAAGCACATTACCATCAGGAAATGGCCTCAGCAGGAAACCGTGCAGGCATATGTGTAA 2202 0.4519 MSSSESPRADSRSAHRQPYQATFSTLTLDLKAKWPIGVDSCLPLLMEQSETISDSAPRKFVRQLDFTAIGVDSVNVELPRAPESLTHLELLPQTQKPLPQAILRPQSLLPSQIQIEPKLQSQAYSPTQSKLPLRSPGQQLWSSSHTQQQRPPQSQVNQQSKPRPQLVSPARRIPHPVQKISMTTLPLLKQESPSKRPWHNVGSKDSTPKKQKQCNCKNSRCLKLYCECFAAGIHCDGCNCLNCHNNVDNEAARQEAVGIILERNPNAFRPKIASSPQEPRGSKEEAEIQVLGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCMDCKNFEGSEERIALDPMNLKQAANAAISQAIGYSSYGMDITPKRRKLKEIISGKAITDQAVLTAQFQQENDLVVATTGPSASVASDIANVTIPGSARSTYRSPLADALQPQDVKYLCSLFVVLSGLAAESYAESRGRVDQQMGMKKSETSVASSAELLQDNNKKVHKPVVDGHAKKNGAERSGTSDSGSEGDDMQNYGRPLSPGTLALMCDEQDEMFLSDSAANAVACDDQKMIHKSSNSDVYVDIYGEQERLVLTRFWDVLRGLITHGSIREAMCSPSANKEVGSKQEAVDNSNNGAETDLSEKGKGVHIHSNRIANSHIPLATKVSETSSAMPNGPDNDDLSLRIGLPTGIAGNMLASITGISSFLASLSESKPRSTCISNLILKLLKHITIRKWPQQETVQAYV 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0665 733 MobiDBLite consensus disorder prediction 469 485 - -
Alju08g0665 733 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 211 246 IPR005172 -
Alju08g0665 733 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 296 330 IPR005172 -
Alju08g0665 733 MobiDBLite consensus disorder prediction 460 526 - -
Alju08g0665 733 MobiDBLite consensus disorder prediction 610 631 - -
Alju08g0665 733 MobiDBLite consensus disorder prediction 486 506 - -
Alju08g0665 733 MobiDBLite consensus disorder prediction 121 165 - -
Alju08g0665 733 MobiDBLite consensus disorder prediction 121 213 - -
Alju08g0665 733 MobiDBLite consensus disorder prediction 183 201 - -
Alju08g0665 733 PANTHER TESMIN/TSO1-RELATED 94 595 IPR028307 -
Alju08g0665 733 SMART CXC_2 293 334 IPR033467 -
Alju08g0665 733 SMART CXC_2 209 249 IPR033467 -
Alju08g0665 733 ProSiteProfiles CRC domain profile. 210 333 IPR005172 -
Alju08g0665 733 MobiDBLite consensus disorder prediction 610 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0665 Alju-ChrAlju08 4925070 4933483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0665 58 602 CPP Transcription Factor Family AT4G29000 44.086 5.28e-128 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Alju08g0665 TCR 3e-12 No_clan