Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0659 ATGCCAAAGATGAGTGAGTGTTTGGTGGTGTTCGTTATGACTCTTTCATTGTCGTTGGATGTGAAATCCCAGGGAACACCAGAGAGCCTGCAAGATAATATGCCTCAAAACTTCCATCCAAGTAAAGGAGTTATAATAGCAATCCTCACTGTTATGTTTGTGATATCATTTCTCCTTCTGGCTTATGTAAAGTTCTGTAAAATCCGGTCCACTGAGTCCCTAAACCTAGATATGAACAATCCAGGAATAGGCCGATCCAGATCAGGATATTCCGGGATAGACAAACAAGTAATCGAATCACTGCCTTTTTTCAAGTTCTCTTCCCTCAAGGGCTCAAAAGAAGGCCTAGAATGTGCCGTTTGCTTGTCGAAATTCGACGACGCCGAGGTTCTAAGGTTGCTGCCCAAGTGTAAGCATGCTTTCCACATGAATTGCATCGATAAGTGGCTCGAATGTCACTCGACATGTCCTCTTTGCAGGTACACGGTTGACCCTGAGGACATCAAGACATTCAATTCCTCCATCAGCTCCAGGTTCCTTCGAGTTCCCTCCGACATAACAGAGGTCCCTGATCTTGAAATCTTCGTCCAGAGGGATCAATCGAACCAGAACTCAAACATATTTAGCAATCGGAAACCTGCGCACAGGCTCAATCATAAAATAGTCATATCCGATGTTGCTACGAGGAGCAGGTGGAGTGATCTTAATTCCTCGGACCTGCTGTCGTTGAATTCTGAGATTCTCAGTGCGATGTCGAGCGCGACATTCTCTGGTTCCAACGAGGAAGACAACTCGTTTACGTTGTTGACTGCTCCGGGAGAGAAGAGATCTAAGTCGGAGATTGCCAACGTGGCGAGATTTGCAGAAATCAGAGTGGAGAACAATGTGAGGGAAGAGAGAGTGAGGAGGATTTGGTTGCCGATTGTGGAGAGAACAGTGCAGTGGTTTGCGAGACGAGAGAGCGTATTATCGACAGAATCGAGACACAAAGGATTTGCTTCAAATGTTTGA 1011 0.457 MPKMSECLVVFVMTLSLSLDVKSQGTPESLQDNMPQNFHPSKGVIIAILTVMFVISFLLLAYVKFCKIRSTESLNLDMNNPGIGRSRSGYSGIDKQVIESLPFFKFSSLKGSKEGLECAVCLSKFDDAEVLRLLPKCKHAFHMNCIDKWLECHSTCPLCRYTVDPEDIKTFNSSISSRFLRVPSDITEVPDLEIFVQRDQSNQNSNIFSNRKPAHRLNHKIVISDVATRSRWSDLNSSDLLSLNSEILSAMSSATFSGSNEEDNSFTLLTAPGEKRSKSEIANVARFAEIRVENNVREERVRRIWLPIVERTVQWFARRESVLSTESRHKGFASNV 336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0659 336 SUPERFAMILY RING/U-box 96 165 - -
Alju08g0659 336 Pfam Ring finger domain 117 160 IPR001841 -
Alju08g0659 336 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Alju08g0659 336 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 320 - -
Alju08g0659 336 CDD RING-H2_EL5-like 117 160 - -
Alju08g0659 336 FunFam RING-H2 finger protein ATL43 93 167 - -
Alju08g0659 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 168 IPR013083 -
Alju08g0659 336 SMART ring_2 118 159 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju08g0659 Alju-ChrAlju08 4870208 4871218 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0659 38 320 C3H Transcription Factor Family AT2G20030 40.058 1.63e-71 225