Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0654 ATGACTGCAGAAACCCAGAATTCTGAAACAGAGAGCACCTCAAACTCAAGCTCATTCCCATCTTCCCCTACCTCCCCACACTCTCCTCCTTCGGCTCTGACTCTTCAAAACTCTGTTTCGCAAGCTAAAGCTGAGAGCCCGGAATCTAAAAAAGTGAAGAGAATTCGAGACTCCAGCAACCACCCAGTGTACAGGGGGGTTCGTATGCGAAATTGGGGTAAATGGGTGTCTGAAATTCGTGAGCCTCGCAAGAAATCGCGAATATGGCTGGGTACATTTCCGACGCCGGAAATGGCAGCCAGAGCACATGACGTCGCCGCTCTGAGCATCAAAGGCAGCTCTGCTATTCTCAATTTCCCCGAGCTGATCGACCTTCTTCCTCGTCCCGTGTCGCTCGCTCCTCGAGACGTACAGGCGGCGGCGGCGAAGGCTGCTCAGATGGATAAGTTCGACCTGCCGACATCATCGTCCTCTTCATCACTGTCGTCGCTGGTTTCAGCAATGGACTTGGGAACAGAGTCGGAGGAACTGAGCGAGATAATAAAGCTGCCAAACTTGGAAACGAGCAACGACGAGGCGGTGGAATTGATGAAGGAGTTTGTGTACGTGGACTCGGAAGAGGGATGGATGTACGAGCCACCATGGTTACAGAGCATGGAGGACTGTGACGGGTATGTCGCCGATCAGCTGTGGAATTACTGA 702 0.5256 MTAETQNSETESTSNSSSFPSSPTSPHSPPSALTLQNSVSQAKAESPESKKVKRIRDSSNHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAILNFPELIDLLPRPVSLAPRDVQAAAAKAAQMDKFDLPTSSSSSSLSSLVSAMDLGTESEELSEIIKLPNLETSNDEAVELMKEFVYVDSEEGWMYEPPWLQSMEDCDGYVADQLWNY 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0654 233 SUPERFAMILY DNA-binding domain 63 121 IPR016177 GO:0003677
Alju08g0654 233 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Alju08g0654 233 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Alju08g0654 233 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
Alju08g0654 233 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Alju08g0654 233 MobiDBLite consensus disorder prediction 1 45 - -
Alju08g0654 233 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Alju08g0654 233 MobiDBLite consensus disorder prediction 1 60 - -
Alju08g0654 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 28 194 - -
Alju08g0654 233 MobiDBLite consensus disorder prediction 46 60 - -
Alju08g0654 233 FunFam Ethylene-responsive transcription factor 2 62 121 - -
Alju08g0654 233 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Alju08g0654 233 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0654 Alju-ChrAlju08 4843993 4844694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0654 37 225 AP2-EREBP Transcription Factor Family AT5G11590 65.000 1.49e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju08g0654 AP2 2.6e-14 CL0081