Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0637 ATGCGTCGCCACCAGCTCATCAGAGAATGCCCCATTCTCTCTAATATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGAGGAAGGAATCGTTTCGGCTGCAAGCTGTGAACAGGAAGCTGACGGCCATGAATAAACTACTGATGGAGGAAAATGAGAGACTGCAGAAGCAAGTGTCACGGCTGGTTTATGAGAACAGCTTTTTCCGCCAACAGACACAGAATGCGGCCCTTGCTACGACGGACACAAGCTGTGAGTCGGTGGTAACCAGCGGTCAGCACCATGTGACCCCTCAGCATCCACCAAGGGATGCCAGCCCTGCTGGACTTTTGTCCATTGCAGAGGAGACCTTAGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGATTGCCCTGGAGTGGCAGCACGAGCCTGCGGCCTTGTGGGTTTGGAACCTACCAGGGTTGCGGAAATACTCAAAGATAGGCCCTCGTGGTTTCGTGATTGTCGAGCCTTGGACGTTCTGAATGCGATGCCCACTGGAAATGGGGGAACCATTGAAATGCTTTACATGCAGTTGTATTCACCAACAACTTTGGCTCCTGCTCGTGACTTTTGGTTGCTGCGCTACACATCTGTTTTGGAGGACGGCAGTCTAGTGGTCTGTGAAAGATCACTTAACAACATCCAGAATGGACCTACAGTGCCACCAGTGCAGCACTTTGTCAGGGCAGACATGCTGCCTAGCGGGTATCTGATTAGACCATGTGAAGGGGGCGGATCCATTATTCATATTGTTGATCATATGGACTTAGAGCCCTGGAGTGTCCCTGAAGTGTTGCGCCCACTTTACGAGTCATCAACGCTGCATGCTCAAAAGACAACAATGGCGGCCTTACGTCATTTGAGGCAGATCTCTCAAGAAGCTTCTCAACCAAATGTCTCCGGATGGGGGAGAAGGCCTGCAGCTCTACGTGCGCTTAGTCAGCGATTGAGCAAGGGTTTCAATGAAGCAGTCAATGGGTTTGCAGATGATGGCTGGTCTATGTTAGAAAGTGATGGCATTGATGATGTCACCCTTCTGGTGAATTCATCTCCCAACAAGATGGTGGGAGTCAATTTTGTTCAGAACAATGGATTTCCTTATATGAGCACTTCAGTGCTATGTGCCAAAGCATCAATGCTGTTACAGAATGTACCTCCAGCAATTCTTCTCAGATTCTTGCGGGAGCACAGATCAGAGTGGGCAGATAGCAGTATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGGTCCCTGTAGCTTGCCTGGAGCCCTAGCAGGGAGTTTTGGGGGTCAGGTCATTCTGCCTCTGGCTCACACTATTGAGCATGAAGAGTTCATGGAGGTCATTAAGCTTGAAAACATGGGTTACTACAGGGATGACATGACTATACCTGAGGATGTTTTCCTCTTGCAACTTTGTAATGGAGCAGATGAGCATGCAAATGGTTCCTATGCAGAACTCATTTTTGCTCCTATTGATGCATCTTTCTCAGATGATGCACCTGTATTACCTTCTGGTTTTCGCATCATAGCTCTCAATTCTAACACGGATGCTTCAAGTTCAAATCGTACACTTGATCTTGCTTCTTCTCTTGAAGTTAAAACCACAGCAAACAAAGCAGGCACTGGCAGTGACAATAATGGTAACACAAAATCTGTGATGACAATGGCATTCCAATTTGCATTTGAAGTCCACCTTCAGGACAGCGTAGCCTCTATGGCCCGGCAGTATGCCCGCAGCATCATTGCTTCTGTTCAAAGGGTTGCATTAGCACTCTCCCCTTTGCATTTTGGTTCTCGTAATGGTTTGCATGCTCCAACTGGCCCTCCTGAGGCACAAACACTTGCTCGTTGGATTTGTCAAAGCCATAGATGCTATCTAGGTGTAGAACTGCTAAAATGTGAAGGCAGTGAGTCCATTCTCAAATCCCTTTGGCATCACTCAGATGCGGTCCTGTGCTGCTCTTTGAAGGCATTACCCACGTTCACATTCGCTAATCAAGCTGGACTTGACATGCTTGAGACAACTTTGGTGGCTCTTCAAGACATCACTCTGGAAAGAATCTTTGACGACGGTGGAAAGAAAACCCTTTTCTCTGAGTTCCCCCATATAATGCAACAGGGATTTATGTGCATGCAAGGTGGGATCTGCTTATCCAGCATGGGAAGGCCAGTGTCGTATGAGAGAGCAGTGGCATGGAAAGTGTCGAACGAAGAAGAAGTGGCCCAATGCATATGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2385 0.4801 MRRHQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESFRLQAVNRKLTAMNKLLMEENERLQKQVSRLVYENSFFRQQTQNAALATTDTSCESVVTSGQHHVTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHDCPGVAARACGLVGLEPTRVAEILKDRPSWFRDCRALDVLNAMPTGNGGTIEMLYMQLYSPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNIQNGPTVPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLHAQKTTMAALRHLRQISQEASQPNVSGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPNKMVGVNFVQNNGFPYMSTSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGALAGSFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTIPEDVFLLQLCNGADEHANGSYAELIFAPIDASFSDDAPVLPSGFRIIALNSNTDASSSNRTLDLASSLEVKTTANKAGTGSDNNGNTKSVMTMAFQFAFEVHLQDSVASMARQYARSIIASVQRVALALSPLHFGSRNGLHAPTGPPEAQTLARWICQSHRCYLGVELLKCEGSESILKSLWHHSDAVLCCSLKALPTFTFANQAGLDMLETTLVALQDITLERIFDDGGKKTLFSEFPHIMQQGFMCMQGGICLSSMGRPVSYERAVAWKVSNEEEVAQCICFMFINWSFV 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0637 794 SUPERFAMILY Homeodomain-like 2 37 IPR009057 -
Alju08g0637 794 SUPERFAMILY Bet v1-like 119 331 - -
Alju08g0637 794 CDD bZIP 28 67 - -
Alju08g0637 794 SMART START_1 119 329 IPR002913 GO:0008289
Alju08g0637 794 Gene3D - 1 39 - -
Alju08g0637 794 Pfam MEKHLA domain 653 793 IPR013978 -
Alju08g0637 794 Gene3D - 150 335 IPR023393 -
Alju08g0637 794 ProSiteProfiles START domain profile. 110 324 IPR002913 GO:0008289
Alju08g0637 794 ProSiteProfiles 'Homeobox' domain profile. 1 35 IPR001356 GO:0003677
Alju08g0637 794 CDD homeodomain 2 36 IPR001356 GO:0003677
Alju08g0637 794 CDD START_ArGLABRA2_like 114 329 - -
Alju08g0637 794 Pfam START domain 120 328 IPR002913 GO:0008289
Alju08g0637 794 Pfam Homeodomain 3 34 IPR001356 GO:0003677
Alju08g0637 794 Coils Coil 41 72 - -
Alju08g0637 794 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 794 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0637 Alju-ChrAlju08 4729203 4734780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0637 1 794 Homeobox Transcription Factor Family AT4G32880 77.945 0.0 1290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju08g0637 START 1.4e-50 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0637 08 4729203 4734780 Alju08g0637 08 4729203 4734780 ECH