Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0635 ATGGCCAAAGGAGTTCATCCAACGTTTCCAAAGTGCCTCACGTTCATATGCCTTGTCATGTTGGTGTTCAATCTTCACTTCTCACAATCACAAGGAGATCAACAAGAACAAGAACTTGAGCTTCTGTTATCCTTCAAAGCTTCAGCCAAGGACCCAAGTCAATCTCTTTCAAACTGGCTCAATTCTTCAGCCACCTTCTGTGACTGGTATGGCCTCACCTGCCACCAAACCTCTTCTCACGTAAACTCCATCCAACTTTCAGGTAAAAACATGTCCGGCACAATTTCCTCGTCCATATTTCAACTCCCAAACGTTACAAACATCGACCTCTCCAGCAATCAGTTTGCTGGTGAAATTTCTTTCTCCTTCCCTTCTTCCTCTCTCTCCTCACTTCTTTACCTTAATCTCAGCAACAACAACCTAACTGGCTCGTTGCCTGAGTTCTTATTTTCTGTGTCGCTTTTCCGCCTGGAATCCTTGGATCTCTCAAACAACATGTTTTCCGGGATAATTCCACATGAGGTTGGTCTTCTTTCTAGCCTAAAATACCTTGATGTGGGAGGGAACGTTCTGGTTGGAAGAATTCCAAGTTCCATTACCAACATCACAGGGTTAGAATACTTGACATTGGCTTCCAACCAGTTAATAGGTGACATCCCACGTGACATAGGTGTCATGAAGAGCTTGAGGTGGATTTACATGGGTTACAACAATCTCTCCGGAGAAATCCCCAAGAGCATAGGCAACTTATTGTCTCTGCATCATCTCGATCTTGTTTACAACAATCTCACAGGTTTCATTCCTGAGTCTCTTGGAAACCTCACCAATCTTGAGTTTCTGTTTCTCTACAGAAACAACCTCATGGGTTCGATTCCCACTTCCATCTTCCACCTGAAAAATCTTGTTTCGCTCGATCTCAGTGATAATTCTCTCTGGGGAGAGATTTCTGAACTTGTGATTAACCTTCAGAGACTGGAGATTCTTCAGCTTTTCTCAAACAACTTTACTGGAAAGATTCCGAAGGCTTTAACAGCTTTACCTCGGCTTCAAGTTCTTCAACTGTGGTCCAACAGATTAACGGGCGAGATTCCAAAACAGCTGGGAATGTATAACAACATCACTGTTCTAGACCTTTCCACCAACAACCTCTCCGGAGAGATCCCACATGGCTTATGTGACTCCAGGAATCTTTACAAGCTTATTCTTTTCTCCAACTCTCTTGAAGGTCAAATCCCACACAGTTTCAGCTCCTGCATAACCCTCCGCCGAGTTCGTCTCCAGAACAACAAGCTTTTCGGCCAATTACCGTCGGAATTCACAAAACTTCCACAGGTATACCTGTTAGACATGTCTGGCAACAACCTTTCCGGGAGGATCGATGACCGGAAGTGGGACATGCCGGCGCTTCAGTTGCTGAATTTGGCTAAAAACAATTTCTCAGGAGAGTTACCTGATTCTTTCGGGAGTAACGAACTTGAGAACCTGGACTTGTCGGAGAACCAGTTTTCAGGTGATATTCCACGTGGCATGGGAAGCTTATCGGAGCTGGTGCAGTTGAAGCTGAGCAGAAACAGGCTGTCAGGTAACATCCCAGATGAGCTTTCTTCGTGCAAGAAGCTTGTGTCTTTAGACCTCAGTCAGAATCAACTTAGCGGGCAAATACCGATTAGTCTCGGAGAAATGGCAGTTCTAGGAATGCTTGATCTGTCTGAAAACCAATTGAGAGGTGAAATTCCAGAAAATCTAGCAAGTGCTGAGTCACTCGTAGAACTCAACATATCCTATAACCGTTTTCATGGGAGGTTACCGTCCACAGGAGCTTTCCTCGCCATTAATAGCAGTGACGTCACCGGGAACGACCTTTGTGAGAGTGATGACGTCAGTGACAGTAGGAGCGGTTTACCACCCTGCAACAAAAGAGAAGATAATAATAAGAACCCATTTTGGTGGTTTTTTCTGTTTGGCCTTGTAGGGTTCCCGCTTGCTGCTTTTGTTATTGTTGTCTTCTTACGTAGAAGACAGAACTTGGAGGTGACGACCACAAGGGTTGAAAATGAAGACGTTACATGGGAAATGAGATACTTTGACTCCAAGGCTTCAAAACTCATCACCATCCACGATGTAATATCTTCTGCAAAAGAAGGAGTACTCGTAATCACTCAAGGACGAAAAGAGACAGTGCAATTCGAGGTGAAAGAGATGAGTGACCTGAATTGCTTCTCGGAGGACATTGGTAAACTTCGGCATCCAAACATGGTTAAGTTGATGGGAATATGCAGGTGTGGGAAAGGAGGGTACTTGGTGTATGAATATGTGGAAGGAAAATATTTAAGCGACGTCGTTGGGAGTTTAAGCTGGGAACGACGACGGAATATTGCACTTGGAATTGCAAAGGCACTCAAGTATTTGCATGCTCATGGTTCACCGTTTGCTAATTTGGTAGGTGAGATGTCACCCGATAGAGTTGTGGTCGACGCAAAAGATGTTCCTCGTCTCATGTTGTGCCCTCTCAAGGCTTCCATTTCTTCACCTTACGTTGCCCCAGAATCAAGAAATGAGAAGGAGGTGACAGAGAAGACTGACATGTACGGACTCGGGGTTATTCTGATAGAATTATTGACGGGGAGAAGTTCAGTGGACGAAGAGGTGGGCATGCAACACGAGAGCATCGTGGAGTGGGCCCGTTATTGTTATTCGGATTGTCATCTGGATACCTGGGTCGACCCGAACGTGAAGGGCGGGGTTGCGGCGTCAGCCCAAAACGACATCGTTGAGGTTATGAACCTGGCCCTCCAGTGCACAGCCACTGACCCCACAGCTAGGCCGAGCGCAAGCCACGTGTTCAAAGCCCTAAACGCTTGA 2862 0.4567 MAKGVHPTFPKCLTFICLVMLVFNLHFSQSQGDQQEQELELLLSFKASAKDPSQSLSNWLNSSATFCDWYGLTCHQTSSHVNSIQLSGKNMSGTISSSIFQLPNVTNIDLSSNQFAGEISFSFPSSSLSSLLYLNLSNNNLTGSLPEFLFSVSLFRLESLDLSNNMFSGIIPHEVGLLSSLKYLDVGGNVLVGRIPSSITNITGLEYLTLASNQLIGDIPRDIGVMKSLRWIYMGYNNLSGEIPKSIGNLLSLHHLDLVYNNLTGFIPESLGNLTNLEFLFLYRNNLMGSIPTSIFHLKNLVSLDLSDNSLWGEISELVINLQRLEILQLFSNNFTGKIPKALTALPRLQVLQLWSNRLTGEIPKQLGMYNNITVLDLSTNNLSGEIPHGLCDSRNLYKLILFSNSLEGQIPHSFSSCITLRRVRLQNNKLFGQLPSEFTKLPQVYLLDMSGNNLSGRIDDRKWDMPALQLLNLAKNNFSGELPDSFGSNELENLDLSENQFSGDIPRGMGSLSELVQLKLSRNRLSGNIPDELSSCKKLVSLDLSQNQLSGQIPISLGEMAVLGMLDLSENQLRGEIPENLASAESLVELNISYNRFHGRLPSTGAFLAINSSDVTGNDLCESDDVSDSRSGLPPCNKREDNNKNPFWWFFLFGLVGFPLAAFVIVVFLRRRQNLEVTTTRVENEDVTWEMRYFDSKASKLITIHDVISSAKEGVLVITQGRKETVQFEVKEMSDLNCFSEDIGKLRHPNMVKLMGICRCGKGGYLVYEYVEGKYLSDVVGSLSWERRRNIALGIAKALKYLHAHGSPFANLVGEMSPDRVVVDAKDVPRLMLCPLKASISSPYVAPESRNEKEVTEKTDMYGLGVILIELLTGRSSVDEEVGMQHESIVEWARYCYSDCHLDTWVDPNVKGGVAASAQNDIVEVMNLALQCTATDPTARPSASHVFKALNA 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0635 953 SMART LRR_typ_2 561 585 IPR003591 -
Alju08g0635 953 SMART LRR_typ_2 128 152 IPR003591 -
Alju08g0635 953 SMART LRR_typ_2 513 537 IPR003591 -
Alju08g0635 953 SMART LRR_typ_2 274 298 IPR003591 -
Alju08g0635 953 SMART LRR_typ_2 154 178 IPR003591 -
Alju08g0635 953 SMART LRR_typ_2 466 489 IPR003591 -
Alju08g0635 953 SMART LRR_typ_2 250 273 IPR003591 -
Alju08g0635 953 SMART LRR_typ_2 202 226 IPR003591 -
Alju08g0635 953 SMART LRR_typ_2 346 370 IPR003591 -
Alju08g0635 953 SUPERFAMILY Protein kinase-like (PK-like) 745 951 IPR011009 -
Alju08g0635 953 SUPERFAMILY L domain-like 80 248 - -
Alju08g0635 953 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Alju08g0635 953 SMART LRR_sd22_2 178 204 - -
Alju08g0635 953 SMART LRR_sd22_2 298 324 - -
Alju08g0635 953 SMART LRR_sd22_2 537 558 - -
Alju08g0635 953 SMART LRR_sd22_2 250 276 - -
Alju08g0635 953 FunFam Leucine-rich repeat receptor protein kinase EMS1 245 329 - -
Alju08g0635 953 Pfam Protein kinase domain 841 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0635 953 Gene3D Transferase(Phosphotransferase) domain 1 774 953 - -
Alju08g0635 953 SUPERFAMILY L domain-like 193 481 - -
Alju08g0635 953 Gene3D Phosphorylase Kinase; domain 1 697 773 - -
Alju08g0635 953 ProSiteProfiles Protein kinase domain profile. 651 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0635 953 Pfam Protein tyrosine and serine/threonine kinase 744 806 IPR001245 GO:0004672|GO:0006468
Alju08g0635 953 PRINTS Leucine-rich repeat signature 157 170 - -
Alju08g0635 953 PRINTS Leucine-rich repeat signature 298 311 - -
Alju08g0635 953 FunFam Leucine-rich repeat receptor protein kinase EMS1 153 244 - -
Alju08g0635 953 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 330 630 - -
Alju08g0635 953 Gene3D Ribonuclease Inhibitor 372 629 IPR032675 -
Alju08g0635 953 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 395 951 - -
Alju08g0635 953 FunFam Leucine-rich repeat receptor-like kinase 37 152 - -
Alju08g0635 953 Gene3D Ribonuclease Inhibitor 250 371 IPR032675 -
Alju08g0635 953 Gene3D Ribonuclease Inhibitor 191 249 IPR032675 -
Alju08g0635 953 Pfam Leucine rich repeat 491 550 IPR001611 GO:0005515
Alju08g0635 953 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Alju08g0635 953 SUPERFAMILY L domain-like 411 606 - -
Alju08g0635 953 Gene3D Ribonuclease Inhibitor 34 190 IPR032675 -
Alju08g0635 953 ProSiteProfiles Leucine-rich repeat profile. 130 152 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0635 Alju-ChrAlju08 4711749 4714705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0635 35 951 Receptor kinase-like Gene Family AT2G25790 51.765 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Alju08g0635 Pkinase 4.9e-08 CL0016