Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0604 ATGACGTTTCTCGCAGAGGCAATTTCCAAACTCGGGTTAAAACTGCATGCATGGGCCTATCTTGAGGCGCCACTTCTTCTTTTCCCTCAAGTTCCTTCAGTTCACACTCTGTTTACGATGTCTCCTTCCTTGTGCCCTCCATCCTCCAACATGTTCCTCTCTCTCTTCTGTCTCGTTTTCTTTCTCTCCGGCGTTCAATCCGACGACCGTCAACTCCTTCTCGACTTGAAATCTTCACTCCAATATGAGTCAAACTCCCGTGTTTTTAACTCCTGGAATTCCACCAACTCCGTCTGCAATTTCTATGGGATTTCCTGCAACTCCAACGGTTCAGTGACGGATATCGATCTTTCTTCTCATAATCTTTCTGGGGTTCTGCCTCTTGACTCCATTTGCAAGCTCCCGTCTCTGCGTAAGCTGGCATTCGGGTTCAACTCCTTGCATGGCAGAGTTGCAGAGGATTTGAGAAACTGTGTCAACTTAGTATACTTAGACTTGGGAAACAACGATTTGTCAGGGCCATTTCCTGATATATCTCCTCTCAGCCAATTGCAATATTTGTTTTTGAATCAGAGTGGATTTTCTGGAACTTTCCCATGGAAGTCTCTGCTAAACATGACGCGTCTCGTGCAGTTAAGTGTTGGAGACAACCCATTTCACCTCACACCTTTCCCAACTGAGTTGGTCAATCTTAAAAGCCTCCAATGGCTCTATCTACCGAATTGTAGCCTCGGAGGGGAAATACCAGCGGGAATAGGTAATCTCACTCAGCTTGTAAATTTAGAGTTTTCGGATAATTTTATATCCGGCGAGATTCCTTCAGAGATTGGGAATCTTGGGAAGTTATGGCAGTTGGAGTTCTACAACAACTCAATAACTGGGAAATTTCCAGTCGGGTTCAGAAATCTCACAAGCCTTGCGAGATTGGACGGATCCATTAATCATCTTGAAGGCGATCTTTCCGAGTTGAAGTTCTTGACGAATCTGGTTTCCCTACAGCTGTTTGAAAACAAGTTAACAGGGGAAATTCCACCTGAGTTCGGTGAATTCAAAAAGCTCGTGAATCTCTCTTTGTACATTAATCAATTGTCAGGGCCCATTCCTCAAAAACTTGGCTCTTGGGCAGAGTTTGATTTCATTGACGTGTCAGAGAACATGTTGACGGGTCCAATTCCGCCTTACATGTGCAGCAAAGGAAAGATGCATCAACTACTTGTACTTCAAAACAAGCTTTCTGGGGAAATACCAGCTACTTATGCGAACTGCACAACATTGAATCGGTTCAGAGTCAACGATAACTTGCTTTCAGGAACGATTCCTTCTGGAATATGGGGATTGCCGAATGCGGAGATAATCGATGTTGAATTGAATCAGTTGGAGGGTTCAATTACGTCAGATATCAAGAACGCGAAGGCCTTAGCCATTTTACATGCTAAAAGGAACCGCTTTTCCGGTGAGATACCGAGAGAAATTTCAGAAGCAACGTCCTTGGTGACGATTGATCTAAGTGAGAATCAGATTTCCGGGGAAATTCCATTGGGTATTGGGGAGCTGAAAAGTTTGAGCCGTCTTCATTTACAGAAGAACAAATTATCTGGGTCTATACCTGACTCTTTGGGGTTATGTACTTTCCTTAGTGATATTGAACTGGCAGAGAATTCACTCTCTGGAGGTATCCCTTCATCTTTGGGTAATTTACCAGCTCTTAATGCATTGAATTTGTCCCAAAACGAACTCTCTGGTGAGATTCCGGCGAGTTTCACACTCCTACGGTTGAGCCTCTTTGATCTATCGAACAACCAATTAACAGGTCCAATCCCACAATCTCTCTCAATTCAAGCTTTCAATGGTAGTCTTGATGGAAACCCAGGTCTGTGCACTCTTGACGCGATCAACTATTTTAGGCCTTGCCCTGCTCATAAAGGCATCCCTAAAAGCGTCCGTACACTCATCGTTTGCTTCACAATCGCTTTGATTTTGCTTCTTGTTTGTTTGGCTCTTTACATGAAGCTAAATAAGAAGGAAAAATGTCGAGAACGGTCTTTGAAGGAAGAATCATGGGACCTAAAATCCTTCCACGTGCTGAGTTTCACCGAGGACGAGATTCTAGATTCCATTAAGCAGGAGAATCTCATAGGGAAAGGAGGATCAGGAAACGTGTACAAAGTCCCACTCTCAAACGGTAAAGAACTCGCCGTTAAGCACATATGGAATATGGATCCTGCTGGCCGGAAGAAGAGCCGCAGTAGTAGTACTCCGATGATCGGAAAGCACAACGGCAAGTCCAAGTCAAAGGAATTTGATGCAGAGGTACAGACACTGAGCTCTATAAGACATGTGAACGTCGTGAAGCTTTACTGCAGCATCACAAGCGAGGATTCTAGCTTGCTTGTTTATGAGTATCTTCCAAATGGAAGCTTATGGGATCGACTTCATGCAAGTGGGAAGATAGAACTAGACTGGGAAAAGAGATATGAGATCGCACTTGGAGCTTCCAAGGGATTAGAGTACTTACATCACGGGTGTGAGAAGCCAATGATTCACAGAGACGTCAAATCTAGTAACATTTTGTTGGATGAGTTCATGAAGCCTAGGATTGCTGATTTTGGACTTGCCAAGATTGTTCAGCCCAATTTTAGCCACGATTCTACACAAGTCATTGCAGGAACACATGGGTATATTGCTCCTGAATATGGGTACACATATAAAGTGAACGAGAAAAGTGATGTGTATAGCTTCGGAGTGGTATTGATGGAGCTGATAACAGGTAAAAGGCCAATAGAGGCAGAGTATGGGGAAAACAAAGACATAGTGAGCTGGGTTTGCAGCAAGATGCAGAGTGAAGAGAGCACAATGAGTGTGGTGGACTGTAGAATACAAGATATGTATAAAGAAGAGGCTGTGAAGATGTTGAGAATAGCGATTCTGTGCACGGCAAGGCTTCCAGCTTTAAGGCCTACCATGAGGAGTGTGGTTCAAATGCTTGAGGAATCTGAGCCTTGTAAATTGGTCGGAATCGTCATTAGCAAAAATGGCTCTGAAAATAAAATGCAGGACCCTCACACGCCTAAGCTCAGACCAAGCACTTGA 3090 0.4392 MTFLAEAISKLGLKLHAWAYLEAPLLLFPQVPSVHTLFTMSPSLCPPSSNMFLSLFCLVFFLSGVQSDDRQLLLDLKSSLQYESNSRVFNSWNSTNSVCNFYGISCNSNGSVTDIDLSSHNLSGVLPLDSICKLPSLRKLAFGFNSLHGRVAEDLRNCVNLVYLDLGNNDLSGPFPDISPLSQLQYLFLNQSGFSGTFPWKSLLNMTRLVQLSVGDNPFHLTPFPTELVNLKSLQWLYLPNCSLGGEIPAGIGNLTQLVNLEFSDNFISGEIPSEIGNLGKLWQLEFYNNSITGKFPVGFRNLTSLARLDGSINHLEGDLSELKFLTNLVSLQLFENKLTGEIPPEFGEFKKLVNLSLYINQLSGPIPQKLGSWAEFDFIDVSENMLTGPIPPYMCSKGKMHQLLVLQNKLSGEIPATYANCTTLNRFRVNDNLLSGTIPSGIWGLPNAEIIDVELNQLEGSITSDIKNAKALAILHAKRNRFSGEIPREISEATSLVTIDLSENQISGEIPLGIGELKSLSRLHLQKNKLSGSIPDSLGLCTFLSDIELAENSLSGGIPSSLGNLPALNALNLSQNELSGEIPASFTLLRLSLFDLSNNQLTGPIPQSLSIQAFNGSLDGNPGLCTLDAINYFRPCPAHKGIPKSVRTLIVCFTIALILLLVCLALYMKLNKKEKCRERSLKEESWDLKSFHVLSFTEDEILDSIKQENLIGKGGSGNVYKVPLSNGKELAVKHIWNMDPAGRKKSRSSSTPMIGKHNGKSKSKEFDAEVQTLSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHASGKIELDWEKRYEIALGASKGLEYLHHGCEKPMIHRDVKSSNILLDEFMKPRIADFGLAKIVQPNFSHDSTQVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELITGKRPIEAEYGENKDIVSWVCSKMQSEESTMSVVDCRIQDMYKEEAVKMLRIAILCTARLPALRPTMRSVVQMLEESEPCKLVGIVISKNGSENKMQDPHTPKLRPST 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0604 1029 Pfam Leucine rich repeat N-terminal domain 67 107 IPR013210 -
Alju08g0604 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Alju08g0604 1029 Gene3D Ribonuclease Inhibitor 396 642 IPR032675 -
Alju08g0604 1029 ProSiteProfiles Protein kinase domain profile. 706 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0604 1029 FunFam Receptor-like protein kinase HAIKU2 689 801 - -
Alju08g0604 1029 Pfam Protein kinase domain 708 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0604 1029 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 802 1010 - -
Alju08g0604 1029 FunFam Leucine-rich receptor-like protein kinase family protein 226 322 - -
Alju08g0604 1029 Gene3D Phosphorylase Kinase; domain 1 689 801 - -
Alju08g0604 1029 FunFam Probable inactive receptor kinase RLK902 66 225 - -
Alju08g0604 1029 MobiDBLite consensus disorder prediction 744 758 - -
Alju08g0604 1029 FunFam Leucine-rich repeat receptor-like protein kinase TDR 323 639 - -
Alju08g0604 1029 ProSitePatterns Protein kinases ATP-binding region signature. 712 734 IPR017441 GO:0005524
Alju08g0604 1029 Gene3D Ribonuclease Inhibitor 223 323 IPR032675 -
Alju08g0604 1029 Gene3D Transferase(Phosphotransferase) domain 1 802 1004 - -
Alju08g0604 1029 Gene3D Ribonuclease Inhibitor 324 395 IPR032675 -
Alju08g0604 1029 MobiDBLite consensus disorder prediction 742 766 - -
Alju08g0604 1029 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 58 995 - -
Alju08g0604 1029 Gene3D Ribonuclease Inhibitor 67 222 IPR032675 -
Alju08g0604 1029 SMART serkin_6 706 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0604 1029 SUPERFAMILY L domain-like 314 643 - -
Alju08g0604 1029 SUPERFAMILY L domain-like 68 395 - -
Alju08g0604 1029 SUPERFAMILY Protein kinase-like (PK-like) 698 996 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0604 Alju-ChrAlju08 4471386 4474886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0604 40 1010 Receptor kinase-like Gene Family AT1G09970 61.452 0.0 1165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju08g0604 Pkinase 3.7e-42 CL0016