Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0596 ATGGGAACTGGTTGGAGAAGAGCCTTTTGCACTCGCGACCCAGAATCCAGAGTTTCAGACAAGCAACAGAGAAGCCCGAGCCCGAGCCCCAGAAGCTGTGCCAAATTGGGTTTTTTCTCCAGCACTCCACGCTCACAAGGGTCTCAGCCTCTGTCAAGCCCAAGCTTGCGTTGCCGAACCATCGCAGAAGCGGTTCAAACCGCAGCATATGATGATAGCCCCAGATTTCCATGCAAAAACACCACTCCTAAGGCAACCAAATCCCCCAAAGCACCATCCAACGCCTCAAATCCAACTTCTCCTCGCTCTCCTCTAAAGTTGTCTCTCTTCAAGAATAGCTTCAAATTTAGAAGTACTTGTGGGCTGTGTTTGAATAGCGTGAAGGCAGGTCAGGGCAGGGCCATATACACAGCAGAATGTTCTCACGCTTTTCACTTTCCCTGTATCGTTGCTCATGTACGAAAGCACGGAAGCCCTGTCTGCCCAGTCTGCAGCGCCACCTGGAAAGACATACCTCTACTCGCCCTTCACAACAACAACTCCTCTGAATCATCTCAACACAACGATGTCGTCGTCGCTGAAAAGATAATTGATCATCCAACTGCCTGCGATAACACCAGAACGGAAAAACCTTCCCCTTCAGATTTCAGCACCAAGAACGTTGAACCTCCACCACAACAACGACATCACTCCAAGCATTCCGATTCAATCAGGTCCTACGACGATGATGAGCCACTTCTATCTCCTGCCTCTGGAGGCCGAATCATTACCATACCTGAAGCTGATGAGAACTGTGAAGATGACGACGACGAAGTTGTGGAGTTCCAGGGATTTTTCGTGGATCCCAAAACTTCATCCTCAATCAAATCTTGCTCCCGTGACTTGCAATCAAAAGAAGAATCTAGAAATGTTTTGGTGAAATTGGTGCCGGAGTGCGCTATAATCTCAGTATCTCGGAGCCACCAGACTTGTGCTTTGGTTTTAAAAGTGAAGGCTCCGGTGGCTCGTACCACCAATAATATTGCATCGCCGATTCTGGACCCATCTCAGAGAGCGCCCATCGATCTTGTCACCGTTCTTGACGTAAGTGGCAGCATGACCGGAGCGAAGCTTCACATGTTAAAGCGCGCTATGCGTTTGGTTATTTCGTCCCTCGGCCCAGCCGACAGGCTCTCCATAGTGGCTTTTTCGGCTAGCGCCAAACGTTTATTGCCTTTAAGAAGGATGTCGGCTCAAGGACAGCGCGCGGCTCGCCGCATCATTGATCGGCTTGTCTGCGGCCAAGGATCTTGTGTGGGTGACGCTTTGAGGAAAGCCAACAAAGTGCTTGAGGACCGGAGGGAGAAAAACCCGGTGGCCAGCGTTATGCTCTTATCGGACGGCCAAGACGAGAGAGTCCAGCATGTGGACCCAGATAGTCAACGAAAAGGCTCCGCTCATGGGCCTTGTGCTCGTTTCGCTCACATCGAGATTCCAGTTCATGCCTTTGGGTTTGGACAAAAAGCCGGATACAACCACGAGCCGGCTGAGGATGCGTTTGCTAAGTGCGTTGGTGGGTTATTGAGCGTGGTGGTGCAGGACTTGAGAATTCAGCTCGGCTTCCAGGCAGGCTCGGTGCCAGCTGAAATTAGCGCTGTTTACTCTTGCAGTGGGAGGCCCACGGTGCTGAGCTCAGCGGCCGTGCGGCTCGGCGATTTGTGCGCGGAAGAAGAGAGGGAGATTCTGGTGGAGCTGAGAGTTCCTTCCTCAGCTTACGGGGCCCACCATGTGATGAAGTTACGGTGCATTTTTAAAGACCCTGCCACTCAGGAGATTATCTACGGTGGGGAACAGAGTATTATGGTGCCGCCACCTCAAACGGCACGAAGTTCTGGCATCAGAATCGAGAGGTTGAGGAATCTGTTCGTAACTACGAGGGCCATAGCCGAGTCTCGGAGACTGTTGGAGCACAATGACTTCACGAGCGCGCATCATTTGCTAACTTCGACTCGAGCTCTTTTGGTGCAGTCAGGCTTGATTTCGGCTGACGAGTTCGTTCGTGTCTTGGAAGCTGAGATGGCAGAACTTCATTGGCGGAGACAGCAGCAGGTGATGGCGATGCAACGGAGAAGAGGCAGTGAAAGAGAAACGTCGTGGATGGTGGATGAGGATGGGGAGCCGCTGACGCCGACATCGGCTTGGAGAGCGGCTGAGAAGCTGGCCAAGATGGCCATGATGAAGAAGTCGTTGAATCGTGTTAGCGACTTGCACGGCTTCGAAAACGCTAGATTTTAA 2274 0.5189 MGTGWRRAFCTRDPESRVSDKQQRSPSPSPRSCAKLGFFSSTPRSQGSQPLSSPSLRCRTIAEAVQTAAYDDSPRFPCKNTTPKATKSPKAPSNASNPTSPRSPLKLSLFKNSFKFRSTCGLCLNSVKAGQGRAIYTAECSHAFHFPCIVAHVRKHGSPVCPVCSATWKDIPLLALHNNNSSESSQHNDVVVAEKIIDHPTACDNTRTEKPSPSDFSTKNVEPPPQQRHHSKHSDSIRSYDDDEPLLSPASGGRIITIPEADENCEDDDDEVVEFQGFFVDPKTSSSIKSCSRDLQSKEESRNVLVKLVPECAIISVSRSHQTCALVLKVKAPVARTTNNIASPILDPSQRAPIDLVTVLDVSGSMTGAKLHMLKRAMRLVISSLGPADRLSIVAFSASAKRLLPLRRMSAQGQRAARRIIDRLVCGQGSCVGDALRKANKVLEDRREKNPVASVMLLSDGQDERVQHVDPDSQRKGSAHGPCARFAHIEIPVHAFGFGQKAGYNHEPAEDAFAKCVGGLLSVVVQDLRIQLGFQAGSVPAEISAVYSCSGRPTVLSSAAVRLGDLCAEEEREILVELRVPSSAYGAHHVMKLRCIFKDPATQEIIYGGEQSIMVPPPQTARSSGIRIERLRNLFVTTRAIAESRRLLEHNDFTSAHHLLTSTRALLVQSGLISADEFVRVLEAEMAELHWRRQQQVMAMQRRRGSERETSWMVDEDGEPLTPTSAWRAAEKLAKMAMMKKSLNRVSDLHGFENARF 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0596 757 MobiDBLite consensus disorder prediction 73 104 - -
Alju08g0596 757 Gene3D von Willebrand factor, type A domain 355 524 IPR036465 -
Alju08g0596 757 MobiDBLite consensus disorder prediction 79 104 - -
Alju08g0596 757 SUPERFAMILY RING/U-box 113 171 - -
Alju08g0596 757 ProSiteProfiles Zinc finger RING-type profile. 120 165 IPR001841 -
Alju08g0596 757 MobiDBLite consensus disorder prediction 201 254 - -
Alju08g0596 757 Pfam von Willebrand factor type A domain 356 462 IPR002035 -
Alju08g0596 757 Pfam RING-like zinc finger 120 149 IPR001841 -
Alju08g0596 757 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 174 IPR013083 -
Alju08g0596 757 SMART ring_2 120 164 IPR001841 -
Alju08g0596 757 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 118 752 - -
Alju08g0596 757 MobiDBLite consensus disorder prediction 225 242 - -
Alju08g0596 757 ProSiteProfiles VWFA domain profile. 355 500 IPR002035 -
Alju08g0596 757 MobiDBLite consensus disorder prediction 21 55 - -
Alju08g0596 757 MobiDBLite consensus disorder prediction 206 224 - -
Alju08g0596 757 SMART VWA_4 353 538 IPR002035 -
Alju08g0596 757 MobiDBLite consensus disorder prediction 1 55 - -
Alju08g0596 757 SUPERFAMILY vWA-like 353 528 IPR036465 -
Alju08g0596 757 CDD vWA_C3HC4_type 354 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0596 Alju-ChrAlju08 4379291 4381663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0596 112 270 C3H Transcription Factor Family AT3G03550 26.347 3.01e-06 48.1