Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0562 ATGCCTCACAGAGCGACTTACATTTTCCCGAGGCAATTTCCGGACCGTAGATTGGATGAATCTTCCCAACAGCTCTTAGATCACGAGAGGAAGAAGATCCTCGACTCCATAAAATCGGGAACATTTGGCGCTGAAGGTGACGATGATAAGAAAAAGCCGTCACTATCAACTACTACTCCCATAAAGAACGATGTCATTTATTCGCCAAGTAAACACTCAGCTGTATCCGATCTTCTCACGGGTGGTGGCAAGCTTCGGGCTAAACACAAGCAAGTTGTTGATATCTGCAATTGGTCGACAGAGAAAAAGGGGGGAAGATCGGGTCACGTGAAACCGTACTCTCACAGGTCGTCCAGCGAGGAAGAACGCGAGCTTCTTCTTCCGCCGGAGTCGTCGGTGCCGCCGCCGCCTCCCCCACCGGAGACAATAAAGAATAATTCTGCCATTGACCAGAGCTTTGATCGGCAGGTGTCGTTACCAAGGTTGTCCAGTAATGGGAGTAGCTATGCTGGGAGCTTGTTCTCGGGGACAACGTTGGATGGCAATTTTTCCAGTGACATTATTAAGGAGGAAACGACGTCGTCGATTTTCACCTCGTCGAGGAAGCAAGATAATGAAGATGAAAAGGAGAGCAATGATAAGATGGTGCAGAAGTCCAAAGAGAGCTACCACCTGCAACTTACGTTGGCTAAGAGGCTCACTGGTCTAGCAAGTATTGCTACTGAGCCTGCTCTTACTCTGGGAACTGAAATCGAAACTTGGGATGCCGAATCCGTTTCTTATCGTTTATGGGTGAGCGGCTGTTTATCATACTCTGACAAGATAACGGATGGTTTTTATAACATTCTGGGGATAAATCCATATTTGTGGGTAATGTGCAATAATGAAGAGGAAGGAAGGCGGCTGCCACCTCTGTTGGCGCTTAAAGCAGTTGAACCTAGCGAGACATCTATGGAGGTGGTTCTTGTTGATATCCATGAGGATTCCAGGCTAAAGCAACTTCAAGATAAAGCACAAGAATTGTATTGTGCTTCAGAGAACACCTTGGTATTGGTGGAAAAGCTAGGAAAACTTGTTGCCATTTATATGGGGGGTACTTTTCCGGCAGAACAAGGTGATCTCCATGGGCACTGGAAGTTGGTTAGTAAGAGATTGAGGAATTTTCACAAGTGTGTTGTGCTTCCTATTGGCAGCCTATCTTCTGGACTTTGTAGGCATCGAGCTATTCTTTTCAAGAGGTTGGCTGATTACATAGGTTTGCCATGTCGTATTGCTCGAGGTTGCAAGTATTGTGTTGCTGACTATCGTTCCTCTTGCCTTGTCAAGATTAAAGATGACAAGCAATTCTCTAGGGAATATGTAGTTGATCTAGTTGGGGAGCCAGGAAATGTCCATGGGCCAGATTCCTCTATCAATGGAGCATATGTCTCCTCCATGCCTTCCCCGTTTCAAATTTCTCATTTAAAGGAGTTCCAATCACCATGTCTAGACGTTGCAGCATGTTCTCAATCTTTGAGTCCCAAACATAGTTTTGTGGTTACCGACAGTCGTTTATATTCAGGCTGTGGACAGAACGATCAGCAAGTTAGTGAAACTGATTTGCTAATAAACCCTACGGGCTCCGCTTACGCATCCGTTGATCAAACTTCAGAAGGAACGGATCCTCCTCTGCCTCCTTTTAGCTTGAAAAGGAAAGTTGAGGAATGTGCAGTTCTAGGTTCAATTTCGCCTTCGATCTGGGAAGGTGTTTCTGAATCCCTCCATCCACCAGTTGACGCATCATTACATGAATATCCCAGTCTTGGTGAAGATCCAGTTGTAGTACAAGAAACTTCAAACAATGAGAAAAGTTCTCTGAAAAAATCTATATTGAGCTCTTCAAAGCAGTCAGAACCGGAGAAGGTAGACAATGGACTTGAAAACCCGGGCTACTTTCCGGCTACGGATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGACTGGCTGGAGATATCATGGGATGATTTACGCATCAAAGAGCGTGTTGGCGCCGGTTCATTTGGGACAGTGCACCGTGGTGAATGGCATGGATCAGATGTTGCAGTCAAAGTTCTATCAATCCAAGATTTCCGTGATGATCAATTGAAAGAATTTCTGAGAGAGGTTGCAATAATGAAGCGCGTGCGCCATCCAAATGTTGTGCTCTTCATGGGTGCAGTTACAAAACGCCCTCATCTGTCCATAGTGACAGAATATTTGCCTAGGGGTAGTTTATACCGCCTGATTCACAGACCCACAACTGGCGAAAGTCTGGATCAAAGGAGAAAATTGCGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTCCACTGCCTTAACCCTCCGGTTTTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGACAAAAACTGGACCGTAAAGGTGTGCGATTTTGGATTGTCTAGATTCAAGGCCAACACTTTCATATCATCAAAATCAGTTGCTGGAACACCTGAGTGGATGGCTCCTGAATTCCTTCGCGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTCATCTTGTGGGAGCTTGTGACCATGCAACAACCGTGGAGTGGTCTTAGCCCTGCCCAGGTGGTTGGAGCCGTTGCTTTCCAAAATAGGAGGCTTGTTATCCCTCCAAACATCTCCCCAGCACTTAGCTCTCTCATGGAATCTTGTTGGGCTGATGACCCTAATGAACGACCATCTTTCGCTAACATAGTGGTCTCGTTGAAGAAGCTGCTAAAGTCTCCAGCTGAGGCTATAAAAACGGGTAAGTGTATTTCGGACGAGCCCCTTCCGGAGGAAAATTCGATGGATAAGAATGACAGAGAATACATGTGGCACGATCTCGGGCTGCAAATTGTTATGATCCTGGTCATGGTGTTCATGTTCTTGCATATGCACGACATTCCCAGGAAGCTCTTCACCAAGTTCCGTCTTCGTAGCCGATCCGACATTCAAGCCAAGCGTCACTTCGTTCAAGGCGCTCAGTTCCTTGCGCGGGCTAGAGCCTCCAAGACTCGATCCGCTTCGAATTCACTGGCCAAAGATGCCCTAGCCGAAGCAGAGAAAGCCATCGCGCTTGACCCCAAGGATGCCGCCGCTTACCTTCTCAAAGCCTTGGCTCTTGATCTCCAAGGCTTTAGGACTTCGGCTCTTGACTCGATCGACATGGCTTTGTCTCCGCTTGCAATGAAGTCCCTCGACGTTCAAGAGAGAGGGGACGCGCTTCTCAAGAGGGCTGAGTTGAAAATGGCGATGCCTGAACGCGGCCGGGTCGACTCGGCTCTGCCGGATTTGATTGAGTCGGTAAAGCTGAATTCGAAAAACTTCAAGGCTTTTTGTTTGTTAGGGAAATGCTACGAGGCAAAGAAGATGAAAGAGGAAGCCAGGACGGCTTATGAGGAGGCTCTCAAGGTGGAACCCCAGTCAACTGTGGCTCAAGAGGCCTTAAGCCGATTGGGTTCATACTATTCAGAGCCCATGATCCCTTCTCCCTTGAATAATCAACATATCTTTCACCCTGCGGCACATGGCCAGAATACCAATGCCTGGATACCTGACTCCTTAATTATATTTGCATGTAGTTCTGCCTCATTATTGAGGTTCGCTTTTAAATCTGTTTCCTTAGGCTTGGGGATATTTGCAGTCTTGTCAGTATATGCAGCTGATTTTGCACCCCCAATGAAGTCTTTCAGTGTCTGTGTGCGTACTCCTGAACTTTCTTTGGTGGGTCCTCTCTCTTCTCCACCCGCCTTCGAGCTCCACCACCACCTTCTTCTAGGGCTTACTCGACCTCTCTCACTCGCCCCCTGCGAGAGAAGGAGCGTGGAGTGA 3885 0.47 MPHRATYIFPRQFPDRRLDESSQQLLDHERKKILDSIKSGTFGAEGDDDKKKPSLSTTTPIKNDVIYSPSKHSAVSDLLTGGGKLRAKHKQVVDICNWSTEKKGGRSGHVKPYSHRSSSEEERELLLPPESSVPPPPPPPETIKNNSAIDQSFDRQVSLPRLSSNGSSYAGSLFSGTTLDGNFSSDIIKEETTSSIFTSSRKQDNEDEKESNDKMVQKSKESYHLQLTLAKRLTGLASIATEPALTLGTEIETWDAESVSYRLWVSGCLSYSDKITDGFYNILGINPYLWVMCNNEEEGRRLPPLLALKAVEPSETSMEVVLVDIHEDSRLKQLQDKAQELYCASENTLVLVEKLGKLVAIYMGGTFPAEQGDLHGHWKLVSKRLRNFHKCVVLPIGSLSSGLCRHRAILFKRLADYIGLPCRIARGCKYCVADYRSSCLVKIKDDKQFSREYVVDLVGEPGNVHGPDSSINGAYVSSMPSPFQISHLKEFQSPCLDVAACSQSLSPKHSFVVTDSRLYSGCGQNDQQVSETDLLINPTGSAYASVDQTSEGTDPPLPPFSLKRKVEECAVLGSISPSIWEGVSESLHPPVDASLHEYPSLGEDPVVVQETSNNEKSSLKKSILSSSKQSEPEKVDNGLENPGYFPATDIPRYLNLEPSLAMDWLEISWDDLRIKERVGAGSFGTVHRGEWHGSDVAVKVLSIQDFRDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPTTGESLDQRRKLRMALDVAKGINYLHCLNPPVLHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLSPAQVVGAVAFQNRRLVIPPNISPALSSLMESCWADDPNERPSFANIVVSLKKLLKSPAEAIKTGKCISDEPLPEENSMDKNDREYMWHDLGLQIVMILVMVFMFLHMHDIPRKLFTKFRLRSRSDIQAKRHFVQGAQFLARARASKTRSASNSLAKDALAEAEKAIALDPKDAAAYLLKALALDLQGFRTSALDSIDMALSPLAMKSLDVQERGDALLKRAELKMAMPERGRVDSALPDLIESVKLNSKNFKAFCLLGKCYEAKKMKEEARTAYEEALKVEPQSTVAQEALSRLGSYYSEPMIPSPLNNQHIFHPAAHGQNTNAWIPDSLIIFACSSASLLRFAFKSVSLGLGIFAVLSVYAADFAPPMKSFSVCVRTPELSLVGPLSSPPAFELHHHLLLGLTRPLSLAPCERRSVE 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0562 1294 MobiDBLite consensus disorder prediction 37 63 - -
Alju08g0562 1294 ProSiteProfiles TPR repeat profile. 1127 1160 IPR019734 GO:0005515
Alju08g0562 1294 MobiDBLite consensus disorder prediction 129 143 - -
Alju08g0562 1294 Gene3D Transferase(Phosphotransferase) domain 1 751 939 - -
Alju08g0562 1294 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 239 933 - -
Alju08g0562 1294 ProSitePatterns Protein kinases ATP-binding region signature. 678 699 IPR017441 GO:0005524
Alju08g0562 1294 PRINTS Tyrosine kinase catalytic domain signature 787 805 IPR001245 GO:0004672|GO:0006468
Alju08g0562 1294 PRINTS Tyrosine kinase catalytic domain signature 853 875 IPR001245 GO:0004672|GO:0006468
Alju08g0562 1294 PRINTS Tyrosine kinase catalytic domain signature 746 759 IPR001245 GO:0004672|GO:0006468
Alju08g0562 1294 PRINTS Tyrosine kinase catalytic domain signature 897 919 IPR001245 GO:0004672|GO:0006468
Alju08g0562 1294 SUPERFAMILY Protein kinase-like (PK-like) 651 923 IPR011009 -
Alju08g0562 1294 ProSiteProfiles Protein kinase domain profile. 672 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0562 1294 MobiDBLite consensus disorder prediction 194 218 - -
Alju08g0562 1294 Gene3D Tetratricopeptide repeat domain 1024 1185 IPR011990 GO:0005515
Alju08g0562 1294 Pfam Ethylene-responsive protein kinase Le-CTR1 256 464 - -
Alju08g0562 1294 FunFam Serine/threonine-protein kinase isoform 1 662 750 - -
Alju08g0562 1294 SUPERFAMILY TPR-like 1039 1170 IPR011990 GO:0005515
Alju08g0562 1294 Pfam Protein tyrosine and serine/threonine kinase 672 925 IPR001245 GO:0004672|GO:0006468
Alju08g0562 1294 CDD STKc_MAP3K-like 678 926 - -
Alju08g0562 1294 SMART tpr_5 1090 1126 IPR019734 GO:0005515
Alju08g0562 1294 SMART tpr_5 1127 1160 IPR019734 GO:0005515
Alju08g0562 1294 FunFam Serine/threonine-protein kinase CTR1 751 936 - -
Alju08g0562 1294 MobiDBLite consensus disorder prediction 201 218 - -
Alju08g0562 1294 MobiDBLite consensus disorder prediction 609 632 - -
Alju08g0562 1294 MobiDBLite consensus disorder prediction 609 642 - -
Alju08g0562 1294 MobiDBLite consensus disorder prediction 100 146 - -
Alju08g0562 1294 MobiDBLite consensus disorder prediction 104 127 - -
Alju08g0562 1294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Alju08g0562 1294 MobiDBLite consensus disorder prediction 37 55 - -
Alju08g0562 1294 SMART serkin_6 672 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0562 1294 Gene3D Phosphorylase Kinase; domain 1 665 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0562 Alju-ChrAlju08 4036818 4054733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0562 1 940 MAP Kinase Kinase Kinase AT4G24480 57.216 0.0 1056
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Alju08g0562 PK_Tyr_Ser-Thr 1.1e-65 CL0016